Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC20.92■□□□□ 0.94
SBNO1A3KN83 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC20.92■□□□□ 0.94
SBNO1A3KN83 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC20.92■□□□□ 0.94
SBNO1A3KN83 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC20.92■□□□□ 0.94
SBNO1A3KN83 AC013355.1-201ENST00000562625 723 ntBASIC20.92■□□□□ 0.94
SBNO1A3KN83 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
SBNO1A3KN83 AF254983.2-201ENST00000612331 135 ntBASIC20.92■□□□□ 0.94
SBNO1A3KN83 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SBNO1A3KN83 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SBNO1A3KN83 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SBNO1A3KN83 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC20.92■□□□□ 0.94
SBNO1A3KN83 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SBNO1A3KN83 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SBNO1A3KN83 AMT-224ENST00000635808 1610 ntTSL 5 BASIC20.92■□□□□ 0.94
SBNO1A3KN83 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SBNO1A3KN83 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SBNO1A3KN83 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SBNO1A3KN83 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC20.92■□□□□ 0.94
SBNO1A3KN83 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SBNO1A3KN83 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC20.91■□□□□ 0.94
SBNO1A3KN83 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SBNO1A3KN83 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SBNO1A3KN83 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SBNO1A3KN83 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC20.91■□□□□ 0.94
SBNO1A3KN83 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SBNO1A3KN83 EEF1DP6-201ENST00000449232 372 ntBASIC20.91■□□□□ 0.94
SBNO1A3KN83 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC20.91■□□□□ 0.94
SBNO1A3KN83 AC100850.1-201ENST00000506768 649 ntBASIC20.91■□□□□ 0.94
SBNO1A3KN83 AC005740.2-201ENST00000511085 419 ntBASIC20.91■□□□□ 0.94
SBNO1A3KN83 AL161670.2-201ENST00000557650 1227 ntBASIC20.91■□□□□ 0.94
SBNO1A3KN83 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC20.91■□□□□ 0.94
SBNO1A3KN83 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC20.91■□□□□ 0.94
SBNO1A3KN83 AC026740.1-201ENST00000607068 791 ntBASIC20.91■□□□□ 0.94
SBNO1A3KN83 MIR7845-201ENST00000618396 99 ntBASIC20.91■□□□□ 0.94
SBNO1A3KN83 AL023803.2-201ENST00000620080 638 ntBASIC20.91■□□□□ 0.94
SBNO1A3KN83 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SBNO1A3KN83 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
SBNO1A3KN83 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SBNO1A3KN83 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC20.91■□□□□ 0.94
SBNO1A3KN83 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SBNO1A3KN83 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SBNO1A3KN83 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SBNO1A3KN83 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC20.91■□□□□ 0.94
SBNO1A3KN83 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SBNO1A3KN83 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SBNO1A3KN83 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SBNO1A3KN83 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SBNO1A3KN83 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC20.91■□□□□ 0.94
SBNO1A3KN83 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SBNO1A3KN83 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SBNO1A3KN83 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC20.9■□□□□ 0.94
SBNO1A3KN83 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SBNO1A3KN83 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SBNO1A3KN83 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SBNO1A3KN83 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.9■□□□□ 0.94
SBNO1A3KN83 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC20.9■□□□□ 0.94
SBNO1A3KN83 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SBNO1A3KN83 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SBNO1A3KN83 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SBNO1A3KN83 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SBNO1A3KN83 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SBNO1A3KN83 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC20.9■□□□□ 0.94
SBNO1A3KN83 AL136309.1-201ENST00000403917 691 ntBASIC20.9■□□□□ 0.94
SBNO1A3KN83 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SBNO1A3KN83 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC20.9■□□□□ 0.94
SBNO1A3KN83 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SBNO1A3KN83 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SBNO1A3KN83 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SBNO1A3KN83 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC20.9■□□□□ 0.94
SBNO1A3KN83 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SBNO1A3KN83 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SBNO1A3KN83 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.9■□□□□ 0.94
SBNO1A3KN83 AC007787.1-201ENST00000588095 1583 ntBASIC20.9■□□□□ 0.94
SBNO1A3KN83 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SBNO1A3KN83 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SBNO1A3KN83 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SBNO1A3KN83 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC20.9■□□□□ 0.94
SBNO1A3KN83 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SBNO1A3KN83 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SBNO1A3KN83 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SBNO1A3KN83 KRT8P29-201ENST00000420409 1371 ntBASIC20.89■□□□□ 0.94
SBNO1A3KN83 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.94
SBNO1A3KN83 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SBNO1A3KN83 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.89■□□□□ 0.94
SBNO1A3KN83 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
SBNO1A3KN83 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SBNO1A3KN83 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC20.89■□□□□ 0.93
SBNO1A3KN83 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SBNO1A3KN83 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC20.89■□□□□ 0.93
SBNO1A3KN83 AC011742.3-201ENST00000439053 820 ntBASIC20.89■□□□□ 0.93
SBNO1A3KN83 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC20.89■□□□□ 0.93
SBNO1A3KN83 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC20.89■□□□□ 0.93
SBNO1A3KN83 AC008267.1-201ENST00000474858 1069 ntBASIC20.89■□□□□ 0.93
SBNO1A3KN83 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC20.89■□□□□ 0.93
SBNO1A3KN83 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SBNO1A3KN83 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC20.89■□□□□ 0.93
SBNO1A3KN83 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC20.89■□□□□ 0.93
SBNO1A3KN83 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC20.89■□□□□ 0.93
SBNO1A3KN83 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SBNO1A3KN83 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms