Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC136621.1-201ENST00000624017 2304 ntBASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC011477.6-201ENST00000604980 1927 ntBASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC027307.3-201ENST00000594262 1100 ntBASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC239800.4-201ENST00000603712 296 ntBASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TCRBV4S1A1TA0A5B7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AL589702.1-201ENST00000641229 1509 ntBASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC099063.4-201ENST00000641099 1602 ntBASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC015922.1-201ENST00000421102 1152 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms