Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 AC005562.1-201ENST00000583030 3219 ntBASIC15.03■□□□□ -0
LRCH1Q9Y2L9 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 AC097359.2-201ENST00000604992 2389 ntBASIC15.03■□□□□ -0
LRCH1Q9Y2L9 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
LRCH1Q9Y2L9 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
LRCH1Q9Y2L9 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LRCH1Q9Y2L9 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LRCH1Q9Y2L9 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
LRCH1Q9Y2L9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LRCH1Q9Y2L9 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.02■□□□□ -0
LRCH1Q9Y2L9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.02■□□□□ -0
LRCH1Q9Y2L9 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
LRCH1Q9Y2L9 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC15.02■□□□□ -0
LRCH1Q9Y2L9 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.02■□□□□ -0
LRCH1Q9Y2L9 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
LRCH1Q9Y2L9 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LRCH1Q9Y2L9 U82695.1-201ENST00000635752 1889 ntBASIC15.02■□□□□ -0
LRCH1Q9Y2L9 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
LRCH1Q9Y2L9 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LRCH1Q9Y2L9 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
LRCH1Q9Y2L9 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LRCH1Q9Y2L9 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LRCH1Q9Y2L9 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.02■□□□□ -0
LRCH1Q9Y2L9 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LRCH1Q9Y2L9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.02■□□□□ -0
LRCH1Q9Y2L9 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.02■□□□□ -0
LRCH1Q9Y2L9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
LRCH1Q9Y2L9 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.02■□□□□ -0
LRCH1Q9Y2L9 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
LRCH1Q9Y2L9 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.02■□□□□ -0
LRCH1Q9Y2L9 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.02■□□□□ -0
LRCH1Q9Y2L9 AC074051.2-201ENST00000565115 352 ntBASIC15.02■□□□□ -0
LRCH1Q9Y2L9 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.02■□□□□ -0
LRCH1Q9Y2L9 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC15.02□□□□□ -0.01
LRCH1Q9Y2L9 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
LRCH1Q9Y2L9 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
LRCH1Q9Y2L9 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
LRCH1Q9Y2L9 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LRCH1Q9Y2L9 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRCH1Q9Y2L9 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
LRCH1Q9Y2L9 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRCH1Q9Y2L9 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRCH1Q9Y2L9 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.02□□□□□ -0.01
LRCH1Q9Y2L9 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
LRCH1Q9Y2L9 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.02□□□□□ -0.01
LRCH1Q9Y2L9 AC152010.1-201ENST00000415779 2006 ntBASIC15.02□□□□□ -0.01
LRCH1Q9Y2L9 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRCH1Q9Y2L9 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
LRCH1Q9Y2L9 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
LRCH1Q9Y2L9 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.02□□□□□ -0.01
LRCH1Q9Y2L9 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRCH1Q9Y2L9 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
LRCH1Q9Y2L9 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms