Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PHF8Q9UPP1 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHF8Q9UPP1 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PHF8Q9UPP1 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC21.05■□□□□ 0.96
PHF8Q9UPP1 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PHF8Q9UPP1 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
PHF8Q9UPP1 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 ACTG1P2-201ENST00000415776 1125 ntBASIC21.04■□□□□ 0.96
PHF8Q9UPP1 ACTG1P11-201ENST00000425411 1125 ntBASIC21.04■□□□□ 0.96
PHF8Q9UPP1 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 MSRA-203ENST00000441698 788 ntTSL 2 BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 AC024681.1-201ENST00000521917 487 ntBASIC21.04■□□□□ 0.96
PHF8Q9UPP1 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 AL133499.1-201ENST00000596207 608 ntBASIC21.04■□□□□ 0.96
PHF8Q9UPP1 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 AC124067.4-201ENST00000519691 2379 ntBASIC21.04■□□□□ 0.96
PHF8Q9UPP1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC21.04■□□□□ 0.96
PHF8Q9UPP1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC21.03■□□□□ 0.96
PHF8Q9UPP1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
PHF8Q9UPP1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC21.03■□□□□ 0.96
PHF8Q9UPP1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC21.03■□□□□ 0.96
PHF8Q9UPP1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHF8Q9UPP1 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHF8Q9UPP1 KRT8P29-201ENST00000420409 1371 ntBASIC21.03■□□□□ 0.96
PHF8Q9UPP1 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHF8Q9UPP1 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PHF8Q9UPP1 FTLP1-201ENST00000449155 526 ntBASIC21.03■□□□□ 0.96
PHF8Q9UPP1 NUP210P1-202ENST00000504322 710 ntBASIC21.03■□□□□ 0.96
PHF8Q9UPP1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
PHF8Q9UPP1 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC21.03■□□□□ 0.96
PHF8Q9UPP1 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC21.03■□□□□ 0.96
PHF8Q9UPP1 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC21.03■□□□□ 0.96
PHF8Q9UPP1 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC21.03■□□□□ 0.96
PHF8Q9UPP1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHF8Q9UPP1 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHF8Q9UPP1 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PHF8Q9UPP1 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC21.03■□□□□ 0.96
PHF8Q9UPP1 AC092978.1-202ENST00000637590 1327 ntBASIC21.03■□□□□ 0.96
PHF8Q9UPP1 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC21.02■□□□□ 0.96
PHF8Q9UPP1 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PHF8Q9UPP1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PHF8Q9UPP1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC21.02■□□□□ 0.96
PHF8Q9UPP1 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PHF8Q9UPP1 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PHF8Q9UPP1 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PHF8Q9UPP1 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PHF8Q9UPP1 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PHF8Q9UPP1 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PHF8Q9UPP1 OARD1-204ENST00000464633 717 ntTSL 2 BASIC21.02■□□□□ 0.96
PHF8Q9UPP1 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC21.02■□□□□ 0.96
PHF8Q9UPP1 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC21.02■□□□□ 0.96
PHF8Q9UPP1 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC21.02■□□□□ 0.96
PHF8Q9UPP1 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC21.02■□□□□ 0.96
PHF8Q9UPP1 PRKXP1-201ENST00000561423 1122 ntBASIC21.02■□□□□ 0.96
PHF8Q9UPP1 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PHF8Q9UPP1 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PHF8Q9UPP1 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
PHF8Q9UPP1 AL023803.2-201ENST00000620080 638 ntBASIC21.02■□□□□ 0.96
PHF8Q9UPP1 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PHF8Q9UPP1 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PHF8Q9UPP1 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PHF8Q9UPP1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
PHF8Q9UPP1 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC21.02■□□□□ 0.95
PHF8Q9UPP1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.02■□□□□ 0.95
PHF8Q9UPP1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
PHF8Q9UPP1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC21.02■□□□□ 0.95
PHF8Q9UPP1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms