Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 C1QBPP1-201ENST00000400117 770 ntBASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 CSF2RBP1-201ENST00000447905 391 ntBASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 AC022210.1-201ENST00000449856 793 ntBASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 RPL13AP25-201ENST00000484130 612 ntBASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 SLC25A47P1-201ENST00000531577 414 ntBASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 SAMD11P1-201ENST00000571429 661 ntBASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 CLUHP6-201ENST00000580789 941 ntBASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KIAA1549Q9HCM3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 BCRP2-202ENST00000447763 634 ntBASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 CTBP2P5-201ENST00000454986 1264 ntBASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 AC022137.2-201ENST00000503482 481 ntBASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 BCRP6-201ENST00000510112 632 ntBASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 BCRP7-201ENST00000511549 544 ntBASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 FAM86MP-201ENST00000340703 885 ntBASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 AC099336.1-201ENST00000417053 1171 ntBASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 AC026410.3-201ENST00000514280 936 ntBASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 AC093813.1-201ENST00000605066 256 ntBASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms