Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.31■□□□□ 0.52
EFCC1Q9HA90 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EFCC1Q9HA90 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EFCC1Q9HA90 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
EFCC1Q9HA90 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
EFCC1Q9HA90 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
EFCC1Q9HA90 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EFCC1Q9HA90 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EFCC1Q9HA90 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.31■□□□□ 0.52
EFCC1Q9HA90 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EFCC1Q9HA90 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EFCC1Q9HA90 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
EFCC1Q9HA90 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EFCC1Q9HA90 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EFCC1Q9HA90 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 AL607033.1-201ENST00000623900 1599 ntBASIC18.3■□□□□ 0.52
EFCC1Q9HA90 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 AC004987.2-201ENST00000395959 1148 ntBASIC18.3■□□□□ 0.52
EFCC1Q9HA90 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 MPRIPP1-201ENST00000452433 1089 ntBASIC18.3■□□□□ 0.52
EFCC1Q9HA90 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 AC124283.3-201ENST00000570869 594 ntBASIC18.3■□□□□ 0.52
EFCC1Q9HA90 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
EFCC1Q9HA90 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 AC134312.5-201ENST00000568031 1313 ntBASIC18.29■□□□□ 0.52
EFCC1Q9HA90 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 FXNP2-201ENST00000411625 547 ntBASIC18.29■□□□□ 0.52
EFCC1Q9HA90 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 KRT90P-201ENST00000549264 1064 ntBASIC18.29■□□□□ 0.52
EFCC1Q9HA90 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC18.29■□□□□ 0.52
EFCC1Q9HA90 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 KRT8P37-201ENST00000451609 1420 ntBASIC18.29■□□□□ 0.52
EFCC1Q9HA90 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EFCC1Q9HA90 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
EFCC1Q9HA90 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
EFCC1Q9HA90 INTS4P2-202ENST00000614726 2019 ntBASIC18.28■□□□□ 0.52
EFCC1Q9HA90 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFCC1Q9HA90 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFCC1Q9HA90 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EFCC1Q9HA90 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.28■□□□□ 0.52
EFCC1Q9HA90 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.28■□□□□ 0.52
EFCC1Q9HA90 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFCC1Q9HA90 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.28■□□□□ 0.52
EFCC1Q9HA90 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFCC1Q9HA90 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
EFCC1Q9HA90 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms