Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.29□□□□□ -0.44
TRGV9Q99603 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
TRGV9Q99603 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.29□□□□□ -0.44
TRGV9Q99603 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
TRGV9Q99603 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
TRGV9Q99603 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 MED15P5-201ENST00000423150 992 ntBASIC12.29□□□□□ -0.44
TRGV9Q99603 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.29□□□□□ -0.44
TRGV9Q99603 FAM58CP-201ENST00000435741 640 ntBASIC12.29□□□□□ -0.44
TRGV9Q99603 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 KRT18P3-201ENST00000451602 1288 ntBASIC12.29□□□□□ -0.44
TRGV9Q99603 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.29□□□□□ -0.44
TRGV9Q99603 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.29□□□□□ -0.44
TRGV9Q99603 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.29□□□□□ -0.44
TRGV9Q99603 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.29□□□□□ -0.44
TRGV9Q99603 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.29□□□□□ -0.44
TRGV9Q99603 AC243562.1-201ENST00000560672 389 ntBASIC12.29□□□□□ -0.44
TRGV9Q99603 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.29□□□□□ -0.44
TRGV9Q99603 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.29□□□□□ -0.44
TRGV9Q99603 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.29□□□□□ -0.44
TRGV9Q99603 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.29□□□□□ -0.44
TRGV9Q99603 AC026120.1-201ENST00000611536 926 ntBASIC12.29□□□□□ -0.44
TRGV9Q99603 FAM197Y3-203ENST00000618346 717 ntBASIC12.29□□□□□ -0.44
TRGV9Q99603 AC092902.6-201ENST00000641783 218 ntBASIC12.29□□□□□ -0.44
TRGV9Q99603 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TRGV9Q99603 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.29□□□□□ -0.44
TRGV9Q99603 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.29□□□□□ -0.44
TRGV9Q99603 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
TRGV9Q99603 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
TRGV9Q99603 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
TRGV9Q99603 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.29□□□□□ -0.44
TRGV9Q99603 ZBED1P1-201ENST00000502364 1930 ntBASIC12.29□□□□□ -0.44
TRGV9Q99603 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.29□□□□□ -0.44
TRGV9Q99603 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.29□□□□□ -0.44
TRGV9Q99603 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.29□□□□□ -0.44
TRGV9Q99603 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV9Q99603 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV9Q99603 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
TRGV9Q99603 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV9Q99603 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV9Q99603 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV9Q99603 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV9Q99603 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV9Q99603 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.28□□□□□ -0.44
TRGV9Q99603 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TRGV9Q99603 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.28□□□□□ -0.44
TRGV9Q99603 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV9Q99603 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
TRGV9Q99603 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV9Q99603 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV9Q99603 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV9Q99603 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV9Q99603 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV9Q99603 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV9Q99603 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV9Q99603 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV9Q99603 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV9Q99603 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV9Q99603 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
TRGV9Q99603 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
TRGV9Q99603 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV9Q99603 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
TRGV9Q99603 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV9Q99603 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.28□□□□□ -0.44
TRGV9Q99603 ADH5P3-201ENST00000433842 1137 ntBASIC12.28□□□□□ -0.44
TRGV9Q99603 SPCS2P4-201ENST00000436160 681 ntBASIC12.28□□□□□ -0.44
TRGV9Q99603 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.28□□□□□ -0.44
TRGV9Q99603 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.28□□□□□ -0.44
TRGV9Q99603 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.28□□□□□ -0.44
TRGV9Q99603 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV9Q99603 LINC01225-203ENST00000563550 1244 ntBASIC12.28□□□□□ -0.44
TRGV9Q99603 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.28□□□□□ -0.44
TRGV9Q99603 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.28□□□□□ -0.44
TRGV9Q99603 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV9Q99603 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV9Q99603 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
TRGV9Q99603 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV9Q99603 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.28□□□□□ -0.44
TRGV9Q99603 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRGV9Q99603 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms