Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RAB40CQ96S21 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.81□□□□□ -0.36
RAB40CQ96S21 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RAB40CQ96S21 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RAB40CQ96S21 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
RAB40CQ96S21 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 AC139749.1-202ENST00000617529 3139 ntBASIC12.81□□□□□ -0.36
RAB40CQ96S21 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB40CQ96S21 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.81□□□□□ -0.36
RAB40CQ96S21 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RAB40CQ96S21 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.81□□□□□ -0.36
RAB40CQ96S21 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.81□□□□□ -0.36
RAB40CQ96S21 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB40CQ96S21 AL450487.1-201ENST00000426799 995 ntBASIC12.81□□□□□ -0.36
RAB40CQ96S21 EMBP1-201ENST00000458200 901 ntBASIC12.81□□□□□ -0.36
RAB40CQ96S21 CXCL1P1-201ENST00000502804 216 ntBASIC12.81□□□□□ -0.36
RAB40CQ96S21 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.81□□□□□ -0.36
RAB40CQ96S21 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC12.81□□□□□ -0.36
RAB40CQ96S21 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.81□□□□□ -0.36
RAB40CQ96S21 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.81□□□□□ -0.36
RAB40CQ96S21 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.81□□□□□ -0.36
RAB40CQ96S21 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.81□□□□□ -0.36
RAB40CQ96S21 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RAB40CQ96S21 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
RAB40CQ96S21 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RAB40CQ96S21 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.81□□□□□ -0.36
RAB40CQ96S21 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
RAB40CQ96S21 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB40CQ96S21 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RAB40CQ96S21 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB40CQ96S21 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB40CQ96S21 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB40CQ96S21 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB40CQ96S21 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB40CQ96S21 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB40CQ96S21 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB40CQ96S21 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB40CQ96S21 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB40CQ96S21 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB40CQ96S21 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB40CQ96S21 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB40CQ96S21 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB40CQ96S21 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB40CQ96S21 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 KRT126P-201ENST00000549467 1181 ntBASIC12.8□□□□□ -0.36
RAB40CQ96S21 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB40CQ96S21 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB40CQ96S21 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB40CQ96S21 FHL2-212ENST00000607522 759 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB40CQ96S21 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB40CQ96S21 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms