Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 AL591122.2-201ENST00000624125 1853 ntBASIC14.87□□□□□ -0.03
NR1H4Q96RI1 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 AC131009.4-201ENST00000624048 1740 ntBASIC14.87□□□□□ -0.03
NR1H4Q96RI1 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 AC105206.1-202ENST00000314927 2368 ntBASIC14.87□□□□□ -0.03
NR1H4Q96RI1 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.87□□□□□ -0.03
NR1H4Q96RI1 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 SIGLEC30P-201ENST00000455569 941 ntBASIC14.86□□□□□ -0.03
NR1H4Q96RI1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 AL671277.2-201ENST00000458060 996 ntBASIC14.86□□□□□ -0.03
NR1H4Q96RI1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 AC124864.1-201ENST00000623408 392 ntBASIC14.86□□□□□ -0.03
NR1H4Q96RI1 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H4Q96RI1 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 AL645929.1-201ENST00000420084 975 ntBASIC14.85□□□□□ -0.03
NR1H4Q96RI1 TSPY22P-201ENST00000427496 604 ntBASIC14.85□□□□□ -0.03
NR1H4Q96RI1 AC063952.2-201ENST00000498792 1227 ntBASIC14.85□□□□□ -0.03
NR1H4Q96RI1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.85□□□□□ -0.03
NR1H4Q96RI1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms