Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 HCG4P8-203ENST00000443049 980 ntBASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 AC012640.2-201ENST00000561606 901 ntBASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
NSMCE2Q96MF7 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 AC108751.1-201ENST00000490852 363 ntBASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 AC117500.6-201ENST00000624871 588 ntBASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NSMCE2Q96MF7 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NSMCE2Q96MF7 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NSMCE2Q96MF7 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NSMCE2Q96MF7 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NSMCE2Q96MF7 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NSMCE2Q96MF7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.88□□□□□ -0.03
NSMCE2Q96MF7 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NSMCE2Q96MF7 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NSMCE2Q96MF7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NSMCE2Q96MF7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NSMCE2Q96MF7 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NSMCE2Q96MF7 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.88□□□□□ -0.03
NSMCE2Q96MF7 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.88□□□□□ -0.03
NSMCE2Q96MF7 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NSMCE2Q96MF7 RPS2P28-201ENST00000314255 741 ntBASIC14.88□□□□□ -0.03
NSMCE2Q96MF7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NSMCE2Q96MF7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NSMCE2Q96MF7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NSMCE2Q96MF7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NSMCE2Q96MF7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.88□□□□□ -0.03
NSMCE2Q96MF7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms