Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 AC092580.3-201ENST00000430932 139 ntBASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 AC097493.3-201ENST00000509725 367 ntBASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 AF228730.6-201ENST00000641497 218 ntBASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 AC084121.3-201ENST00000641716 218 ntBASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 AC138969.3-201ENST00000546612 1459 ntBASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 AC138932.2-201ENST00000548268 1459 ntBASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 AC126755.4-201ENST00000549796 1459 ntBASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 LINC01115-203ENST00000606068 577 ntBASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 AL844908.2-201ENST00000609461 460 ntBASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 TCAF2P1-201ENST00000291129 2421 ntBASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PDLIM5Q96HC4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms