Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VPS33AQ96AX1 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 LINC01101-201ENST00000622953 1884 ntBASIC15.17■□□□□ 0.02
VPS33AQ96AX1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 AC068137.2-201ENST00000605408 478 ntBASIC15.17■□□□□ 0.02
VPS33AQ96AX1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 SPTSSB-204ENST00000617024 1292 ntBASIC15.17■□□□□ 0.02
VPS33AQ96AX1 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 AC026748.1-201ENST00000624349 3251 ntBASIC15.17■□□□□ 0.02
VPS33AQ96AX1 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 AC126365.1-201ENST00000578585 1514 ntBASIC15.17■□□□□ 0.02
VPS33AQ96AX1 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 HLA-A-201ENST00000376802 1334 ntBASIC15.17■□□□□ 0.02
VPS33AQ96AX1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VPS33AQ96AX1 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 CICP4-201ENST00000447359 2812 ntBASIC15.16■□□□□ 0.02
VPS33AQ96AX1 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 AC007967.2-201ENST00000432613 625 ntBASIC15.16■□□□□ 0.02
VPS33AQ96AX1 AC009078.2-202ENST00000463353 338 ntBASIC15.16■□□□□ 0.02
VPS33AQ96AX1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 AC034105.1-201ENST00000563488 319 ntBASIC15.16■□□□□ 0.02
VPS33AQ96AX1 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 AP002472.1-201ENST00000577490 586 ntBASIC15.16■□□□□ 0.02
VPS33AQ96AX1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 AC024267.1-201ENST00000582320 895 ntBASIC15.16■□□□□ 0.02
VPS33AQ96AX1 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 AC073389.1-201ENST00000595595 795 ntBASIC15.16■□□□□ 0.02
VPS33AQ96AX1 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms