Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 AC018892.3-201ENST00000623986 2499 ntBASIC11.81□□□□□ -0.52
NUP35Q8NFH5 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 CICP17-201ENST00000418553 2377 ntBASIC11.81□□□□□ -0.52
NUP35Q8NFH5 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 AP005117.1-201ENST00000584346 1413 ntBASIC11.8□□□□□ -0.52
NUP35Q8NFH5 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 MTRF1LP2-201ENST00000506027 1122 ntBASIC11.8□□□□□ -0.52
NUP35Q8NFH5 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 MMP17-203ENST00000535004 719 ntTSL 3 BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 MIR4313-201ENST00000580760 101 ntBASIC11.8□□□□□ -0.52
NUP35Q8NFH5 MIR4321-201ENST00000592276 80 ntBASIC11.8□□□□□ -0.52
NUP35Q8NFH5 AL121672.3-201ENST00000608644 468 ntBASIC11.8□□□□□ -0.52
NUP35Q8NFH5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC11.8□□□□□ -0.52
NUP35Q8NFH5 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NUP35Q8NFH5 WASH3P-207ENST00000560956 1394 ntBASIC11.79□□□□□ -0.52
NUP35Q8NFH5 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 FO538757.1-201ENST00000623083 1397 ntBASIC11.79□□□□□ -0.52
NUP35Q8NFH5 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 AC092135.3-201ENST00000624151 1846 ntBASIC11.79□□□□□ -0.52
NUP35Q8NFH5 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 AC073508.3-201ENST00000619697 1419 ntBASIC11.79□□□□□ -0.52
NUP35Q8NFH5 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 MED16-201ENST00000269814 1199 ntTSL 5 BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 IGHV3-47-201ENST00000425060 335 ntBASIC11.79□□□□□ -0.52
NUP35Q8NFH5 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 AC139887.3-201ENST00000568585 713 ntBASIC11.79□□□□□ -0.52
NUP35Q8NFH5 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NUP35Q8NFH5 AL359881.3-201ENST00000602640 1721 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms