Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC170Q8IYT3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 MIR346-201ENST00000362234 95 ntBASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 HLA-H-201ENST00000383620 1096 ntBASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 TFAMP1-201ENST00000412727 736 ntBASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 FAM8A3P-201ENST00000427218 844 ntBASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 FAM86C2P-203ENST00000528684 1004 ntBASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 SLC25A6P4-201ENST00000586535 553 ntBASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 SNX18-202ENST00000343017 3140 ntBASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC170Q8IYT3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 AL355306.1-201ENST00000415580 579 ntBASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 AL671277.1-201ENST00000429656 993 ntBASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 AL513190.1-201ENST00000621254 727 ntBASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 HLA-A-201ENST00000376802 1334 ntBASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC170Q8IYT3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms