Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 AL596257.1-201ENST00000641463 2694 ntBASIC14.25□□□□□ -0.13
ATG4DQ86TL0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 RN7SL618P-201ENST00000477850 296 ntBASIC14.25□□□□□ -0.13
ATG4DQ86TL0 INGX-202ENST00000489074 768 ntBASIC14.25□□□□□ -0.13
ATG4DQ86TL0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 AC010336.2-201ENST00000564226 506 ntBASIC14.25□□□□□ -0.13
ATG4DQ86TL0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 DBET-201ENST00000630918 3363 ntBASIC14.25□□□□□ -0.13
ATG4DQ86TL0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.25□□□□□ -0.13
ATG4DQ86TL0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 AL035633.1-201ENST00000406139 838 ntBASIC14.24□□□□□ -0.13
ATG4DQ86TL0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 BASP1P1-201ENST00000430708 665 ntBASIC14.24□□□□□ -0.13
ATG4DQ86TL0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
ATG4DQ86TL0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms