Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 AC044860.1-202ENST00000559481 777 ntBASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 RN7SL204P-201ENST00000582831 262 ntBASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 Z97205.2-201ENST00000564697 1639 ntBASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.4■□□□□ 0.22
TTC39BQ5VTQ0 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
TTC39BQ5VTQ0 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.39■□□□□ 0.22
TTC39BQ5VTQ0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.39■□□□□ 0.22
TTC39BQ5VTQ0 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 AC236430.1-201ENST00000402231 743 ntBASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 PHKG1P2-201ENST00000457537 863 ntBASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 LINC02560-201ENST00000596379 459 ntBASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 AC004840.1-201ENST00000636359 365 ntBASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 AL109936.8-201ENST00000641772 604 ntBASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TTC39BQ5VTQ0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms