Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 BICD1-207ENST00000551848 1962 ntBASIC15.01□□□□□ -0.01
RIF1Q5UIP0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RIF1Q5UIP0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15□□□□□ -0.01
RIF1Q5UIP0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RIF1Q5UIP0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RIF1Q5UIP0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15□□□□□ -0.01
RIF1Q5UIP0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
RIF1Q5UIP0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15□□□□□ -0.01
RIF1Q5UIP0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RIF1Q5UIP0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RIF1Q5UIP0 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RIF1Q5UIP0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RIF1Q5UIP0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15□□□□□ -0.01
RIF1Q5UIP0 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15□□□□□ -0.01
RIF1Q5UIP0 AL139094.1-201ENST00000405549 1188 ntBASIC15□□□□□ -0.01
RIF1Q5UIP0 HCG27-204ENST00000424675 895 ntTSL 3 BASIC15□□□□□ -0.01
RIF1Q5UIP0 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC15□□□□□ -0.01
RIF1Q5UIP0 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC15□□□□□ -0.01
RIF1Q5UIP0 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15□□□□□ -0.01
RIF1Q5UIP0 HNRNPA1P42-201ENST00000458678 957 ntBASIC15□□□□□ -0.01
RIF1Q5UIP0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RIF1Q5UIP0 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC15□□□□□ -0.01
RIF1Q5UIP0 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15□□□□□ -0.01
RIF1Q5UIP0 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RIF1Q5UIP0 MIR4783-201ENST00000580343 82 ntBASIC15□□□□□ -0.01
RIF1Q5UIP0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15□□□□□ -0.01
RIF1Q5UIP0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RIF1Q5UIP0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15□□□□□ -0.01
RIF1Q5UIP0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RIF1Q5UIP0 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15□□□□□ -0.01
RIF1Q5UIP0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RIF1Q5UIP0 PP12613-201ENST00000424958 2230 ntBASIC15□□□□□ -0.01
RIF1Q5UIP0 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15□□□□□ -0.01
RIF1Q5UIP0 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15□□□□□ -0.01
RIF1Q5UIP0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RIF1Q5UIP0 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RIF1Q5UIP0 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RIF1Q5UIP0 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC15□□□□□ -0.01
RIF1Q5UIP0 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC15□□□□□ -0.01
RIF1Q5UIP0 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC15□□□□□ -0.01
RIF1Q5UIP0 AQP7P5-201ENST00000428759 1049 ntBASIC15□□□□□ -0.01
RIF1Q5UIP0 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC15□□□□□ -0.01
RIF1Q5UIP0 AQP7P4-201ENST00000447083 1042 ntBASIC15□□□□□ -0.01
RIF1Q5UIP0 AQP7P2-201ENST00000453967 1041 ntBASIC15□□□□□ -0.01
RIF1Q5UIP0 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC15□□□□□ -0.01
RIF1Q5UIP0 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC15□□□□□ -0.01
RIF1Q5UIP0 AC009955.4-201ENST00000597192 544 ntBASIC15□□□□□ -0.01
RIF1Q5UIP0 AC011247.3-201ENST00000603297 438 ntBASIC15□□□□□ -0.01
RIF1Q5UIP0 AQP7P3-201ENST00000624547 1041 ntBASIC15□□□□□ -0.01
RIF1Q5UIP0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RIF1Q5UIP0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RIF1Q5UIP0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RIF1Q5UIP0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 AC018695.7-201ENST00000624587 2492 ntBASIC14.99□□□□□ -0.01
RIF1Q5UIP0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 AC084752.1-201ENST00000509766 622 ntBASIC14.99□□□□□ -0.01
RIF1Q5UIP0 AC026803.1-201ENST00000569130 274 ntBASIC14.99□□□□□ -0.01
RIF1Q5UIP0 AC107464.3-201ENST00000609172 737 ntBASIC14.99□□□□□ -0.01
RIF1Q5UIP0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 AC244197.1-201ENST00000456494 951 ntBASIC14.99□□□□□ -0.01
RIF1Q5UIP0 CHCHD2P9-201ENST00000461726 456 ntBASIC14.99□□□□□ -0.01
RIF1Q5UIP0 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 AC008805.1-201ENST00000590892 364 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms