Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 MIR346-201ENST00000362234 95 ntBASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 AC211486.1-202ENST00000416371 468 ntBASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 AC211476.1-201ENST00000503899 468 ntBASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 AC079140.1-201ENST00000508039 487 ntBASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 PRYP6-201ENST00000514804 343 ntBASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 KRT8P48-201ENST00000515599 1220 ntBASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 AC105233.2-201ENST00000523697 349 ntBASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 AF228730.5-201ENST00000530288 346 ntBASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 AL513210.1-201ENST00000629608 234 ntBASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 AC008677.1-201ENST00000519230 1561 ntBASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 AC097376.2-205ENST00000610159 5334 ntBASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 CICP23-201ENST00000605013 2741 ntBASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 AC005622.1-201ENST00000636801 1703 ntBASIC13.73□□□□□ -0.21
ATPAF1Q5TC12 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 U82695.1-201ENST00000635752 1889 ntBASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 AP006288.1-201ENST00000446065 395 ntBASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 AP000344.2-201ENST00000512987 629 ntBASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 AC027307.2-201ENST00000591252 911 ntBASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATPAF1Q5TC12 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms