Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00242Q5T6M2 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 HCG4B-203ENST00000450128 991 ntBASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 AC098859.1-201ENST00000502915 1238 ntBASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 AL450472.2-201ENST00000603663 1156 ntBASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 AL445228.2-201ENST00000605589 952 ntBASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00242Q5T6M2 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms