Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTRA3P83110 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HTRA3P83110 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTRA3P83110 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HTRA3P83110 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
HTRA3P83110 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HTRA3P83110 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HTRA3P83110 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HTRA3P83110 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.77■□□□□ 0.44
HTRA3P83110 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HTRA3P83110 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
HTRA3P83110 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HTRA3P83110 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HTRA3P83110 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.77■□□□□ 0.44
HTRA3P83110 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
HTRA3P83110 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
HTRA3P83110 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.77■□□□□ 0.44
HTRA3P83110 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HTRA3P83110 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HTRA3P83110 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.77■□□□□ 0.44
HTRA3P83110 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.77■□□□□ 0.44
HTRA3P83110 AL807761.2-201ENST00000422849 729 ntBASIC17.77■□□□□ 0.44
HTRA3P83110 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC17.77■□□□□ 0.44
HTRA3P83110 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HTRA3P83110 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.77■□□□□ 0.44
HTRA3P83110 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC17.77■□□□□ 0.44
HTRA3P83110 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC17.77■□□□□ 0.44
HTRA3P83110 DBP-202ENST00000593500 712 ntTSL 2 BASIC17.77■□□□□ 0.44
HTRA3P83110 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC17.77■□□□□ 0.44
HTRA3P83110 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HTRA3P83110 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HTRA3P83110 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.77■□□□□ 0.43
HTRA3P83110 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.77■□□□□ 0.43
HTRA3P83110 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
HTRA3P83110 GGT3P-204ENST00000453783 1664 ntBASIC17.77■□□□□ 0.43
HTRA3P83110 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
HTRA3P83110 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HTRA3P83110 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.77■□□□□ 0.43
HTRA3P83110 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HTRA3P83110 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.76■□□□□ 0.43
HTRA3P83110 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.76■□□□□ 0.43
HTRA3P83110 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTRA3P83110 FRMPD2B-201ENST00000431305 1347 ntBASIC17.76■□□□□ 0.43
HTRA3P83110 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTRA3P83110 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.76■□□□□ 0.43
HTRA3P83110 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTRA3P83110 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.76■□□□□ 0.43
HTRA3P83110 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTRA3P83110 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HTRA3P83110 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC17.76■□□□□ 0.43
HTRA3P83110 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HTRA3P83110 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTRA3P83110 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTRA3P83110 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
HTRA3P83110 MIR557-201ENST00000385239 98 ntBASIC17.76■□□□□ 0.43
HTRA3P83110 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.76■□□□□ 0.43
HTRA3P83110 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.76■□□□□ 0.43
HTRA3P83110 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HTRA3P83110 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC17.76■□□□□ 0.43
HTRA3P83110 AP002490.2-201ENST00000524791 560 ntBASIC17.76■□□□□ 0.43
HTRA3P83110 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTRA3P83110 PHBP15-201ENST00000574228 665 ntBASIC17.76■□□□□ 0.43
HTRA3P83110 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
HTRA3P83110 AP001184.1-201ENST00000637936 376 ntBASIC17.76■□□□□ 0.43
HTRA3P83110 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
HTRA3P83110 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC17.76■□□□□ 0.43
HTRA3P83110 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTRA3P83110 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.76■□□□□ 0.43
HTRA3P83110 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
HTRA3P83110 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTRA3P83110 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTRA3P83110 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HTRA3P83110 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.76■□□□□ 0.43
HTRA3P83110 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTRA3P83110 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HTRA3P83110 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.76■□□□□ 0.43
HTRA3P83110 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HTRA3P83110 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
HTRA3P83110 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC17.76■□□□□ 0.43
HTRA3P83110 AL158070.2-201ENST00000623713 1621 ntBASIC17.76■□□□□ 0.43
HTRA3P83110 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HTRA3P83110 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTRA3P83110 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTRA3P83110 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.75■□□□□ 0.43
HTRA3P83110 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HTRA3P83110 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC17.75■□□□□ 0.43
HTRA3P83110 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HTRA3P83110 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HTRA3P83110 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
HTRA3P83110 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HTRA3P83110 CCL25-202ENST00000315626 450 ntTSL 2 BASIC17.75■□□□□ 0.43
HTRA3P83110 NHP2P1-201ENST00000335274 462 ntBASIC17.75■□□□□ 0.43
HTRA3P83110 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
HTRA3P83110 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
HTRA3P83110 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HTRA3P83110 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HTRA3P83110 CISD2-202ENST00000503643 808 ntTSL 2 BASIC17.75■□□□□ 0.43
HTRA3P83110 GDNF-207ENST00000515058 764 ntTSL 5 BASIC17.75■□□□□ 0.43
HTRA3P83110 AP000911.2-201ENST00000534330 502 ntBASIC17.75■□□□□ 0.43
HTRA3P83110 NEU3-207ENST00000534628 746 ntTSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms