Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCNA1P78396 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNA1P78396 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.74■□□□□ 0.43
CCNA1P78396 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.74■□□□□ 0.43
CCNA1P78396 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCNA1P78396 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCNA1P78396 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNA1P78396 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.73■□□□□ 0.43
CCNA1P78396 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CCNA1P78396 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNA1P78396 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCNA1P78396 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCNA1P78396 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNA1P78396 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNA1P78396 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.73■□□□□ 0.43
CCNA1P78396 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCNA1P78396 RNU1-114P-201ENST00000365297 166 ntBASIC17.73■□□□□ 0.43
CCNA1P78396 AC004945.1-201ENST00000416738 983 ntBASIC17.73■□□□□ 0.43
CCNA1P78396 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.73■□□□□ 0.43
CCNA1P78396 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.73■□□□□ 0.43
CCNA1P78396 AKR7A2P1-201ENST00000460134 915 ntBASIC17.73■□□□□ 0.43
CCNA1P78396 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.73■□□□□ 0.43
CCNA1P78396 AC091804.1-201ENST00000486888 567 ntBASIC17.73■□□□□ 0.43
CCNA1P78396 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.73■□□□□ 0.43
CCNA1P78396 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.73■□□□□ 0.43
CCNA1P78396 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.73■□□□□ 0.43
CCNA1P78396 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.73■□□□□ 0.43
CCNA1P78396 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.73■□□□□ 0.43
CCNA1P78396 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCNA1P78396 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.73■□□□□ 0.43
CCNA1P78396 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNA1P78396 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.73■□□□□ 0.43
CCNA1P78396 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNA1P78396 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNA1P78396 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCNA1P78396 AC138028.6-201ENST00000616106 1482 ntBASIC17.73■□□□□ 0.43
CCNA1P78396 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.73■□□□□ 0.43
CCNA1P78396 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNA1P78396 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNA1P78396 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNA1P78396 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNA1P78396 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNA1P78396 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
CCNA1P78396 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.72■□□□□ 0.43
CCNA1P78396 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCNA1P78396 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.72■□□□□ 0.43
CCNA1P78396 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.72■□□□□ 0.43
CCNA1P78396 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCNA1P78396 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.72■□□□□ 0.43
CCNA1P78396 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCNA1P78396 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.72■□□□□ 0.43
CCNA1P78396 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCNA1P78396 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCNA1P78396 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCNA1P78396 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCNA1P78396 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCNA1P78396 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCNA1P78396 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCNA1P78396 AC092506.1-202ENST00000401022 528 ntBASIC17.72■□□□□ 0.43
CCNA1P78396 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.72■□□□□ 0.43
CCNA1P78396 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.72■□□□□ 0.43
CCNA1P78396 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
CCNA1P78396 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.72■□□□□ 0.43
CCNA1P78396 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.72■□□□□ 0.43
CCNA1P78396 RPSAP36-202ENST00000494591 1261 ntBASIC17.72■□□□□ 0.43
CCNA1P78396 SCARNA20.5-201ENST00000516991 142 ntBASIC17.72■□□□□ 0.43
CCNA1P78396 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCNA1P78396 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCNA1P78396 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.72■□□□□ 0.43
CCNA1P78396 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.72■□□□□ 0.43
CCNA1P78396 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.72■□□□□ 0.43
CCNA1P78396 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.72■□□□□ 0.43
CCNA1P78396 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCNA1P78396 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCNA1P78396 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCNA1P78396 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.72■□□□□ 0.43
CCNA1P78396 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCNA1P78396 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCNA1P78396 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CCNA1P78396 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCNA1P78396 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CCNA1P78396 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCNA1P78396 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCNA1P78396 AC080080.1-201ENST00000625121 2420 ntBASIC17.71■□□□□ 0.43
CCNA1P78396 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCNA1P78396 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.71■□□□□ 0.43
CCNA1P78396 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCNA1P78396 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCNA1P78396 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCNA1P78396 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.71■□□□□ 0.43
CCNA1P78396 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.71■□□□□ 0.43
CCNA1P78396 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.71■□□□□ 0.43
CCNA1P78396 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.71■□□□□ 0.43
CCNA1P78396 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.71■□□□□ 0.43
CCNA1P78396 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CCNA1P78396 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCNA1P78396 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.71■□□□□ 0.43
CCNA1P78396 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCNA1P78396 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.71■□□□□ 0.43
CCNA1P78396 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms