Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
RAB5BP61020 AL353807.1-201ENST00000427475 662 ntBASIC12.32□□□□□ -0.44
RAB5BP61020 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC12.32□□□□□ -0.44
RAB5BP61020 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
RAB5BP61020 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC12.32□□□□□ -0.44
RAB5BP61020 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC12.32□□□□□ -0.44
RAB5BP61020 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
RAB5BP61020 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC12.32□□□□□ -0.44
RAB5BP61020 MTDHP1-201ENST00000605323 784 ntBASIC12.32□□□□□ -0.44
RAB5BP61020 AL137784.2-201ENST00000607332 1000 ntBASIC12.32□□□□□ -0.44
RAB5BP61020 AD001527.2-201ENST00000622994 785 ntBASIC12.32□□□□□ -0.44
RAB5BP61020 PFKL-212ENST00000628044 129 ntTSL 3 BASIC12.32□□□□□ -0.44
RAB5BP61020 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 AL031731.1-201ENST00000642131 2094 ntBASIC12.32□□□□□ -0.44
RAB5BP61020 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
RAB5BP61020 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.32□□□□□ -0.44
RAB5BP61020 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 AC004241.5-201ENST00000623870 2448 ntBASIC12.32□□□□□ -0.44
RAB5BP61020 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC12.32□□□□□ -0.44
RAB5BP61020 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.32□□□□□ -0.44
RAB5BP61020 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
RAB5BP61020 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
RAB5BP61020 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5BP61020 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.31□□□□□ -0.44
RAB5BP61020 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5BP61020 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
RAB5BP61020 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5BP61020 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
RAB5BP61020 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
RAB5BP61020 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5BP61020 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
RAB5BP61020 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
RAB5BP61020 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5BP61020 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.31□□□□□ -0.44
RAB5BP61020 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5BP61020 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
RAB5BP61020 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.31□□□□□ -0.44
RAB5BP61020 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.31□□□□□ -0.44
RAB5BP61020 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.31□□□□□ -0.44
RAB5BP61020 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
RAB5BP61020 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5BP61020 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5BP61020 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC12.31□□□□□ -0.44
RAB5BP61020 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.31□□□□□ -0.44
RAB5BP61020 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5BP61020 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5BP61020 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5BP61020 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
RAB5BP61020 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5BP61020 KRASP1-201ENST00000407852 552 ntBASIC12.31□□□□□ -0.44
RAB5BP61020 AC239809.2-201ENST00000415381 517 ntBASIC12.31□□□□□ -0.44
RAB5BP61020 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC12.31□□□□□ -0.44
RAB5BP61020 B3GAT3P1-201ENST00000471720 806 ntBASIC12.31□□□□□ -0.44
RAB5BP61020 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5BP61020 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC12.31□□□□□ -0.44
RAB5BP61020 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC12.31□□□□□ -0.44
RAB5BP61020 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC12.31□□□□□ -0.44
RAB5BP61020 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC12.31□□□□□ -0.44
RAB5BP61020 MIR4674-201ENST00000582457 87 ntBASIC12.31□□□□□ -0.44
RAB5BP61020 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
RAB5BP61020 CR392000.1-201ENST00000624770 1228 ntBASIC12.31□□□□□ -0.44
RAB5BP61020 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5BP61020 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
RAB5BP61020 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
RAB5BP61020 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5BP61020 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5BP61020 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.31□□□□□ -0.44
RAB5BP61020 AC020658.7-201ENST00000624274 2442 ntBASIC12.31□□□□□ -0.44
RAB5BP61020 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5BP61020 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.31□□□□□ -0.44
RAB5BP61020 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.31□□□□□ -0.44
RAB5BP61020 TRIM80P-201ENST00000455685 2848 ntBASIC12.31□□□□□ -0.44
RAB5BP61020 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5BP61020 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5BP61020 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC12.31□□□□□ -0.44
RAB5BP61020 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5BP61020 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5BP61020 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
RAB5BP61020 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5BP61020 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB5BP61020 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
RAB5BP61020 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
RAB5BP61020 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
RAB5BP61020 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RAB5BP61020 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms