Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN12P56749 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN12P56749 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN12P56749 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CLDN12P56749 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN12P56749 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.75□□□□□ -0.21
CLDN12P56749 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN12P56749 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN12P56749 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.74□□□□□ -0.21
CLDN12P56749 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN12P56749 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN12P56749 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN12P56749 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CLDN12P56749 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN12P56749 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN12P56749 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN12P56749 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN12P56749 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN12P56749 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CLDN12P56749 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.74□□□□□ -0.21
CLDN12P56749 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN12P56749 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN12P56749 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CLDN12P56749 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN12P56749 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN12P56749 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
CLDN12P56749 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CLDN12P56749 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
CLDN12P56749 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN12P56749 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN12P56749 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN12P56749 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CLDN12P56749 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.74□□□□□ -0.21
CLDN12P56749 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.74□□□□□ -0.21
CLDN12P56749 KRT18P35-201ENST00000510488 1269 ntBASIC13.74□□□□□ -0.21
CLDN12P56749 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CLDN12P56749 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CLDN12P56749 AC109635.5-201ENST00000533593 962 ntBASIC13.74□□□□□ -0.21
CLDN12P56749 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.74□□□□□ -0.21
CLDN12P56749 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN12P56749 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN12P56749 ARL16-209ENST00000573715 763 ntTSL 3 BASIC13.74□□□□□ -0.21
CLDN12P56749 ARL16-211ENST00000576135 694 ntTSL 3 BASIC13.74□□□□□ -0.21
CLDN12P56749 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.74□□□□□ -0.21
CLDN12P56749 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CLDN12P56749 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN12P56749 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN12P56749 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN12P56749 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.74□□□□□ -0.21
CLDN12P56749 AC117500.6-201ENST00000624871 588 ntBASIC13.74□□□□□ -0.21
CLDN12P56749 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN12P56749 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN12P56749 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CLDN12P56749 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.74□□□□□ -0.21
CLDN12P56749 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN12P56749 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN12P56749 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN12P56749 BNIP3P1-202ENST00000550043 1585 ntBASIC13.74□□□□□ -0.21
CLDN12P56749 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN12P56749 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN12P56749 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
CLDN12P56749 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN12P56749 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.74□□□□□ -0.21
CLDN12P56749 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CLDN12P56749 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN12P56749 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN12P56749 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.73□□□□□ -0.21
CLDN12P56749 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.73□□□□□ -0.21
CLDN12P56749 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CLDN12P56749 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN12P56749 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN12P56749 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN12P56749 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN12P56749 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.73□□□□□ -0.21
CLDN12P56749 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN12P56749 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN12P56749 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN12P56749 REXO1L1P-202ENST00000608646 1974 ntBASIC13.73□□□□□ -0.21
CLDN12P56749 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.73□□□□□ -0.21
CLDN12P56749 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN12P56749 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN12P56749 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN12P56749 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.73□□□□□ -0.21
CLDN12P56749 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN12P56749 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN12P56749 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
CLDN12P56749 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN12P56749 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.73□□□□□ -0.21
CLDN12P56749 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN12P56749 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.73□□□□□ -0.21
CLDN12P56749 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.73□□□□□ -0.21
CLDN12P56749 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.73□□□□□ -0.21
CLDN12P56749 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.73□□□□□ -0.21
CLDN12P56749 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.73□□□□□ -0.21
CLDN12P56749 MROH4P-201ENST00000431302 1578 ntBASIC13.73□□□□□ -0.21
CLDN12P56749 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CLDN12P56749 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN12P56749 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.73□□□□□ -0.21
CLDN12P56749 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.73□□□□□ -0.21
CLDN12P56749 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms