Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC106760.1-201ENST00000508690 800 ntBASIC16.34■□□□□ 0.21
EPHB3P54753 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.34■□□□□ 0.21
EPHB3P54753 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.34■□□□□ 0.21
EPHB3P54753 AP000812.2-201ENST00000538934 718 ntBASIC16.34■□□□□ 0.21
EPHB3P54753 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.34■□□□□ 0.21
EPHB3P54753 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.34■□□□□ 0.21
EPHB3P54753 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.34■□□□□ 0.21
EPHB3P54753 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
EPHB3P54753 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHB3P54753 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.34■□□□□ 0.21
EPHB3P54753 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHB3P54753 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHB3P54753 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
EPHB3P54753 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.34■□□□□ 0.21
EPHB3P54753 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.34■□□□□ 0.21
EPHB3P54753 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
EPHB3P54753 REXO1L6P-201ENST00000603433 1515 ntBASIC16.34■□□□□ 0.21
EPHB3P54753 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHB3P54753 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EPHB3P54753 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
EPHB3P54753 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
EPHB3P54753 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
EPHB3P54753 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.33■□□□□ 0.21
EPHB3P54753 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
EPHB3P54753 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
EPHB3P54753 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
EPHB3P54753 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB3P54753 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.33■□□□□ 0.2
EPHB3P54753 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.33■□□□□ 0.2
EPHB3P54753 AC099336.1-201ENST00000417053 1171 ntBASIC16.33■□□□□ 0.2
EPHB3P54753 FAM21FP-201ENST00000426241 1131 ntBASIC16.33■□□□□ 0.2
EPHB3P54753 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.33■□□□□ 0.2
EPHB3P54753 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB3P54753 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.33■□□□□ 0.2
EPHB3P54753 KRT18P25-201ENST00000508931 1278 ntBASIC16.33■□□□□ 0.2
EPHB3P54753 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.33■□□□□ 0.2
EPHB3P54753 AC079316.1-201ENST00000548397 411 ntBASIC16.33■□□□□ 0.2
EPHB3P54753 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.33■□□□□ 0.2
EPHB3P54753 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.33■□□□□ 0.2
EPHB3P54753 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB3P54753 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB3P54753 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.33■□□□□ 0.2
EPHB3P54753 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB3P54753 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB3P54753 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB3P54753 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
EPHB3P54753 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB3P54753 AL138799.1-201ENST00000448213 1675 ntBASIC16.33■□□□□ 0.2
EPHB3P54753 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.33■□□□□ 0.2
EPHB3P54753 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.33■□□□□ 0.2
EPHB3P54753 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB3P54753 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB3P54753 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB3P54753 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.33■□□□□ 0.2
EPHB3P54753 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB3P54753 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.33■□□□□ 0.2
EPHB3P54753 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB3P54753 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB3P54753 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB3P54753 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
EPHB3P54753 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.32■□□□□ 0.2
EPHB3P54753 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB3P54753 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB3P54753 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB3P54753 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
EPHB3P54753 FLJ16779-201ENST00000612722 7638 ntBASIC16.32■□□□□ 0.2
EPHB3P54753 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.32■□□□□ 0.2
EPHB3P54753 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB3P54753 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
EPHB3P54753 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.32■□□□□ 0.2
EPHB3P54753 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.32■□□□□ 0.2
EPHB3P54753 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
EPHB3P54753 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.32■□□□□ 0.2
EPHB3P54753 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
EPHB3P54753 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
EPHB3P54753 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.32■□□□□ 0.2
EPHB3P54753 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.32■□□□□ 0.2
EPHB3P54753 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.32■□□□□ 0.2
EPHB3P54753 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.32■□□□□ 0.2
EPHB3P54753 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB3P54753 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
EPHB3P54753 GAPDHP40-201ENST00000505218 1006 ntBASIC16.32■□□□□ 0.2
EPHB3P54753 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.32■□□□□ 0.2
EPHB3P54753 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
EPHB3P54753 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.32■□□□□ 0.2
EPHB3P54753 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
EPHB3P54753 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.32■□□□□ 0.2
EPHB3P54753 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB3P54753 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
EPHB3P54753 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
EPHB3P54753 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB3P54753 AP005019.2-201ENST00000615104 511 ntBASIC16.32■□□□□ 0.2
EPHB3P54753 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.32■□□□□ 0.2
EPHB3P54753 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.32■□□□□ 0.2
EPHB3P54753 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB3P54753 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB3P54753 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB3P54753 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB3P54753 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB3P54753 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms