Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.34□□□□□ -0.11
HMGA2P52926 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
HMGA2P52926 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.34□□□□□ -0.11
HMGA2P52926 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.34□□□□□ -0.11
HMGA2P52926 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.34□□□□□ -0.11
HMGA2P52926 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
HMGA2P52926 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.34□□□□□ -0.11
HMGA2P52926 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
HMGA2P52926 AC092902.6-201ENST00000641783 218 ntBASIC14.34□□□□□ -0.11
HMGA2P52926 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
HMGA2P52926 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
HMGA2P52926 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGA2P52926 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.34□□□□□ -0.11
HMGA2P52926 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
HMGA2P52926 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HMGA2P52926 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.33□□□□□ -0.11
HMGA2P52926 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.33□□□□□ -0.11
HMGA2P52926 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.33□□□□□ -0.11
HMGA2P52926 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
HMGA2P52926 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HMGA2P52926 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
HMGA2P52926 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMGA2P52926 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.33□□□□□ -0.12
HMGA2P52926 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
HMGA2P52926 AC007686.3-201ENST00000619017 3487 ntBASIC14.33□□□□□ -0.12
HMGA2P52926 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HMGA2P52926 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HMGA2P52926 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMGA2P52926 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMGA2P52926 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HMGA2P52926 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMGA2P52926 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMGA2P52926 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
HMGA2P52926 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
HMGA2P52926 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMGA2P52926 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMGA2P52926 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.33□□□□□ -0.12
HMGA2P52926 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
HMGA2P52926 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.33□□□□□ -0.12
HMGA2P52926 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.33□□□□□ -0.12
HMGA2P52926 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.33□□□□□ -0.12
HMGA2P52926 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HMGA2P52926 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HMGA2P52926 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HMGA2P52926 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.33□□□□□ -0.12
HMGA2P52926 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.33□□□□□ -0.12
HMGA2P52926 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.33□□□□□ -0.12
HMGA2P52926 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HMGA2P52926 AC091812.2-201ENST00000619081 385 ntBASIC14.33□□□□□ -0.12
HMGA2P52926 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMGA2P52926 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
HMGA2P52926 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMGA2P52926 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMGA2P52926 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HMGA2P52926 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMGA2P52926 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
HMGA2P52926 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HMGA2P52926 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.33□□□□□ -0.12
HMGA2P52926 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMGA2P52926 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
HMGA2P52926 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
HMGA2P52926 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
HMGA2P52926 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.32□□□□□ -0.12
HMGA2P52926 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HMGA2P52926 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.32□□□□□ -0.12
HMGA2P52926 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HMGA2P52926 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.32□□□□□ -0.12
HMGA2P52926 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.32□□□□□ -0.12
HMGA2P52926 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HMGA2P52926 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.32□□□□□ -0.12
HMGA2P52926 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.32□□□□□ -0.12
HMGA2P52926 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.32□□□□□ -0.12
HMGA2P52926 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.32□□□□□ -0.12
HMGA2P52926 AC026120.1-201ENST00000611536 926 ntBASIC14.32□□□□□ -0.12
HMGA2P52926 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms