Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HCFC1P51610 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HCFC1P51610 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.6□□□□□ -0.23
HCFC1P51610 AL022328.3-201ENST00000607943 679 ntBASIC13.6□□□□□ -0.23
HCFC1P51610 AC097724.1-201ENST00000609581 426 ntBASIC13.6□□□□□ -0.23
HCFC1P51610 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.6□□□□□ -0.23
HCFC1P51610 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.6□□□□□ -0.23
HCFC1P51610 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCFC1P51610 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
HCFC1P51610 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HCFC1P51610 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.6□□□□□ -0.23
HCFC1P51610 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.6□□□□□ -0.23
HCFC1P51610 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.6□□□□□ -0.23
HCFC1P51610 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.6□□□□□ -0.23
HCFC1P51610 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HCFC1P51610 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCFC1P51610 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.6□□□□□ -0.23
HCFC1P51610 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCFC1P51610 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.6□□□□□ -0.23
HCFC1P51610 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCFC1P51610 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.6□□□□□ -0.23
HCFC1P51610 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HCFC1P51610 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCFC1P51610 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCFC1P51610 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCFC1P51610 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCFC1P51610 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HCFC1P51610 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
HCFC1P51610 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.59□□□□□ -0.23
HCFC1P51610 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.59□□□□□ -0.23
HCFC1P51610 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.59□□□□□ -0.23
HCFC1P51610 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.59□□□□□ -0.23
HCFC1P51610 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
HCFC1P51610 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HCFC1P51610 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.59□□□□□ -0.23
HCFC1P51610 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.59□□□□□ -0.23
HCFC1P51610 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.59□□□□□ -0.23
HCFC1P51610 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HCFC1P51610 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HCFC1P51610 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCFC1P51610 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.59□□□□□ -0.23
HCFC1P51610 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.59□□□□□ -0.23
HCFC1P51610 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCFC1P51610 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCFC1P51610 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCFC1P51610 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCFC1P51610 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HCFC1P51610 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.59□□□□□ -0.23
HCFC1P51610 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCFC1P51610 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.59□□□□□ -0.23
HCFC1P51610 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.59□□□□□ -0.23
HCFC1P51610 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.59□□□□□ -0.23
HCFC1P51610 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCFC1P51610 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCFC1P51610 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCFC1P51610 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCFC1P51610 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCFC1P51610 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCFC1P51610 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.59□□□□□ -0.23
HCFC1P51610 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.59□□□□□ -0.23
HCFC1P51610 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HCFC1P51610 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.59□□□□□ -0.23
HCFC1P51610 AC007950.2-201ENST00000615045 2347 ntBASIC13.59□□□□□ -0.23
HCFC1P51610 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCFC1P51610 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCFC1P51610 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HCFC1P51610 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.58□□□□□ -0.23
HCFC1P51610 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
HCFC1P51610 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
HCFC1P51610 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
HCFC1P51610 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
HCFC1P51610 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.58□□□□□ -0.23
HCFC1P51610 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.58□□□□□ -0.23
HCFC1P51610 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
HCFC1P51610 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
HCFC1P51610 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HCFC1P51610 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.58□□□□□ -0.24
HCFC1P51610 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HCFC1P51610 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HCFC1P51610 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.58□□□□□ -0.24
HCFC1P51610 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HCFC1P51610 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HCFC1P51610 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.58□□□□□ -0.24
HCFC1P51610 HOMER2P2-201ENST00000451621 847 ntBASIC13.58□□□□□ -0.24
HCFC1P51610 KRT18P25-201ENST00000508931 1278 ntBASIC13.58□□□□□ -0.24
HCFC1P51610 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HCFC1P51610 AC009486.1-201ENST00000569860 813 ntBASIC13.58□□□□□ -0.24
HCFC1P51610 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.58□□□□□ -0.24
HCFC1P51610 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HCFC1P51610 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
HCFC1P51610 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.58□□□□□ -0.24
HCFC1P51610 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HCFC1P51610 AC011270.2-201ENST00000624293 2550 ntBASIC13.58□□□□□ -0.24
HCFC1P51610 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
HCFC1P51610 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HCFC1P51610 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HCFC1P51610 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.58□□□□□ -0.24
HCFC1P51610 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HCFC1P51610 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HCFC1P51610 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms