Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC1P41238 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.23□□□□□ -0.13
APOBEC1P41238 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.23□□□□□ -0.13
APOBEC1P41238 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.23□□□□□ -0.13
APOBEC1P41238 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.23□□□□□ -0.13
APOBEC1P41238 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.23□□□□□ -0.13
APOBEC1P41238 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC1P41238 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC1P41238 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC1P41238 HYMAI-201ENST00000635591 3347 ntBASIC14.23□□□□□ -0.13
APOBEC1P41238 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC1P41238 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOBEC1P41238 SSR4P1-203ENST00000599569 2260 ntBASIC14.22□□□□□ -0.13
APOBEC1P41238 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.22□□□□□ -0.13
APOBEC1P41238 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOBEC1P41238 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOBEC1P41238 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOBEC1P41238 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.22□□□□□ -0.13
APOBEC1P41238 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.22□□□□□ -0.13
APOBEC1P41238 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOBEC1P41238 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOBEC1P41238 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOBEC1P41238 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOBEC1P41238 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOBEC1P41238 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.22□□□□□ -0.13
APOBEC1P41238 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOBEC1P41238 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
APOBEC1P41238 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOBEC1P41238 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOBEC1P41238 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOBEC1P41238 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.22□□□□□ -0.13
APOBEC1P41238 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.22□□□□□ -0.13
APOBEC1P41238 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
APOBEC1P41238 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.22□□□□□ -0.13
APOBEC1P41238 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.22□□□□□ -0.13
APOBEC1P41238 AL390955.2-201ENST00000603032 514 ntBASIC14.22□□□□□ -0.13
APOBEC1P41238 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.22□□□□□ -0.13
APOBEC1P41238 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOBEC1P41238 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOBEC1P41238 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOBEC1P41238 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
APOBEC1P41238 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.22□□□□□ -0.13
APOBEC1P41238 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.22□□□□□ -0.13
APOBEC1P41238 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOBEC1P41238 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.22□□□□□ -0.13
APOBEC1P41238 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOBEC1P41238 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.22□□□□□ -0.13
APOBEC1P41238 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.22□□□□□ -0.13
APOBEC1P41238 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOBEC1P41238 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOBEC1P41238 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.22□□□□□ -0.13
APOBEC1P41238 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOBEC1P41238 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOBEC1P41238 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
APOBEC1P41238 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOBEC1P41238 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOBEC1P41238 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOBEC1P41238 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.21□□□□□ -0.13
APOBEC1P41238 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
APOBEC1P41238 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
APOBEC1P41238 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.21□□□□□ -0.13
APOBEC1P41238 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.21□□□□□ -0.13
APOBEC1P41238 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOBEC1P41238 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.21□□□□□ -0.13
APOBEC1P41238 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.21□□□□□ -0.13
APOBEC1P41238 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.21□□□□□ -0.13
APOBEC1P41238 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
APOBEC1P41238 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
APOBEC1P41238 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.21□□□□□ -0.13
APOBEC1P41238 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOBEC1P41238 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOBEC1P41238 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOBEC1P41238 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOBEC1P41238 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOBEC1P41238 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.21□□□□□ -0.13
APOBEC1P41238 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOBEC1P41238 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOBEC1P41238 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOBEC1P41238 AC138969.3-201ENST00000546612 1459 ntBASIC14.21□□□□□ -0.13
APOBEC1P41238 AC138932.2-201ENST00000548268 1459 ntBASIC14.21□□□□□ -0.13
APOBEC1P41238 AC126755.4-201ENST00000549796 1459 ntBASIC14.21□□□□□ -0.13
APOBEC1P41238 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOBEC1P41238 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOBEC1P41238 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOBEC1P41238 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOBEC1P41238 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.21□□□□□ -0.13
APOBEC1P41238 AL133267.1-201ENST00000398220 340 ntBASIC14.21□□□□□ -0.13
APOBEC1P41238 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOBEC1P41238 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.21□□□□□ -0.13
APOBEC1P41238 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.21□□□□□ -0.13
APOBEC1P41238 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOBEC1P41238 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
APOBEC1P41238 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.21□□□□□ -0.13
APOBEC1P41238 AC009407.1-201ENST00000568958 598 ntBASIC14.21□□□□□ -0.13
APOBEC1P41238 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.21□□□□□ -0.13
APOBEC1P41238 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.21□□□□□ -0.13
APOBEC1P41238 AC005498.2-205ENST00000593218 784 ntBASIC14.21□□□□□ -0.13
APOBEC1P41238 LINC01115-203ENST00000606068 577 ntBASIC14.21□□□□□ -0.13
APOBEC1P41238 AF228730.6-201ENST00000641497 218 ntBASIC14.21□□□□□ -0.13
APOBEC1P41238 AC084121.3-201ENST00000641716 218 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms