Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 CSH2-206ENST00000560142 749 ntTSL 5 BASIC19.18■□□□□ 0.66
TM4SF1P30408 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC19.18■□□□□ 0.66
TM4SF1P30408 MIR4783-201ENST00000580343 82 ntBASIC19.18■□□□□ 0.66
TM4SF1P30408 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC19.18■□□□□ 0.66
TM4SF1P30408 AP000346.4-201ENST00000614827 381 ntBASIC19.18■□□□□ 0.66
TM4SF1P30408 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM4SF1P30408 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC19.18■□□□□ 0.66
TM4SF1P30408 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM4SF1P30408 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.18■□□□□ 0.66
TM4SF1P30408 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM4SF1P30408 AD000864.1-201ENST00000624076 2295 ntBASIC19.18■□□□□ 0.66
TM4SF1P30408 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TM4SF1P30408 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TM4SF1P30408 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TM4SF1P30408 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM4SF1P30408 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF1P30408 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF1P30408 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF1P30408 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF1P30408 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TM4SF1P30408 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF1P30408 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF1P30408 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF1P30408 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC19.17■□□□□ 0.66
TM4SF1P30408 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF1P30408 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF1P30408 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF1P30408 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC19.17■□□□□ 0.66
TM4SF1P30408 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
TM4SF1P30408 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC19.17■□□□□ 0.66
TM4SF1P30408 AL596276.2-201ENST00000447525 331 ntBASIC19.17■□□□□ 0.66
TM4SF1P30408 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC19.17■□□□□ 0.66
TM4SF1P30408 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC19.17■□□□□ 0.66
TM4SF1P30408 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC19.17■□□□□ 0.66
TM4SF1P30408 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC19.17■□□□□ 0.66
TM4SF1P30408 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TM4SF1P30408 AC013355.1-201ENST00000562625 723 ntBASIC19.17■□□□□ 0.66
TM4SF1P30408 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC19.17■□□□□ 0.66
TM4SF1P30408 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC19.17■□□□□ 0.66
TM4SF1P30408 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF1P30408 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF1P30408 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC19.17■□□□□ 0.66
TM4SF1P30408 AL603764.1-201ENST00000636452 321 ntBASIC19.17■□□□□ 0.66
TM4SF1P30408 AC004923.1-202ENST00000642106 209 ntBASIC19.17■□□□□ 0.66
TM4SF1P30408 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF1P30408 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TM4SF1P30408 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF1P30408 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF1P30408 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TM4SF1P30408 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF1P30408 AC006480.2-201ENST00000609770 1337 ntBASIC19.17■□□□□ 0.66
TM4SF1P30408 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF1P30408 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF1P30408 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF1P30408 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC19.17■□□□□ 0.66
TM4SF1P30408 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF1P30408 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF1P30408 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC19.16■□□□□ 0.66
TM4SF1P30408 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TM4SF1P30408 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
TM4SF1P30408 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.16■□□□□ 0.66
TM4SF1P30408 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF1P30408 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.16■□□□□ 0.66
TM4SF1P30408 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.16■□□□□ 0.66
TM4SF1P30408 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF1P30408 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
TM4SF1P30408 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF1P30408 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF1P30408 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF1P30408 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF1P30408 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF1P30408 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF1P30408 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TM4SF1P30408 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF1P30408 AC007274.2-201ENST00000421675 662 ntBASIC19.16■□□□□ 0.66
TM4SF1P30408 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF1P30408 AC069218.1-201ENST00000435269 762 ntBASIC19.16■□□□□ 0.66
TM4SF1P30408 AC011742.3-201ENST00000439053 820 ntBASIC19.16■□□□□ 0.66
TM4SF1P30408 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC19.16■□□□□ 0.66
TM4SF1P30408 AC008267.1-201ENST00000474858 1069 ntBASIC19.16■□□□□ 0.66
TM4SF1P30408 AC021723.1-201ENST00000486306 515 ntBASIC19.16■□□□□ 0.66
TM4SF1P30408 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC19.16■□□□□ 0.66
TM4SF1P30408 EID1-202ENST00000560490 584 ntTSL 3 BASIC19.16■□□□□ 0.66
TM4SF1P30408 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF1P30408 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC19.16■□□□□ 0.66
TM4SF1P30408 AC005324.6-201ENST00000587972 613 ntBASIC19.16■□□□□ 0.66
TM4SF1P30408 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC19.16■□□□□ 0.66
TM4SF1P30408 AC138466.3-201ENST00000619983 221 ntBASIC19.16■□□□□ 0.66
TM4SF1P30408 CLUHP2-201ENST00000426660 1303 ntBASIC19.16■□□□□ 0.66
TM4SF1P30408 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TM4SF1P30408 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF1P30408 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
TM4SF1P30408 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TM4SF1P30408 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TM4SF1P30408 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
TM4SF1P30408 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC19.15■□□□□ 0.66
TM4SF1P30408 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TM4SF1P30408 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.15■□□□□ 0.66
TM4SF1P30408 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TM4SF1P30408 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms