Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA3P22001 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA3P22001 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.94■□□□□ 0.62
KCNA3P22001 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA3P22001 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA3P22001 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
KCNA3P22001 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA3P22001 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA3P22001 AL136309.1-201ENST00000403917 691 ntBASIC18.94■□□□□ 0.62
KCNA3P22001 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC18.94■□□□□ 0.62
KCNA3P22001 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC18.94■□□□□ 0.62
KCNA3P22001 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
KCNA3P22001 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC18.94■□□□□ 0.62
KCNA3P22001 RTN3P1-201ENST00000536295 711 ntBASIC18.94■□□□□ 0.62
KCNA3P22001 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.94■□□□□ 0.62
KCNA3P22001 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC18.94■□□□□ 0.62
KCNA3P22001 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA3P22001 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA3P22001 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
KCNA3P22001 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA3P22001 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.94■□□□□ 0.62
KCNA3P22001 ALOX12P2-203ENST00000570921 1945 ntBASIC18.94■□□□□ 0.62
KCNA3P22001 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC18.93■□□□□ 0.62
KCNA3P22001 ME2P1-201ENST00000426028 1970 ntBASIC18.93■□□□□ 0.62
KCNA3P22001 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNA3P22001 AL158070.2-201ENST00000623713 1621 ntBASIC18.93■□□□□ 0.62
KCNA3P22001 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
KCNA3P22001 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNA3P22001 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNA3P22001 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
KCNA3P22001 AC022188.1-201ENST00000620960 1664 ntBASIC18.93■□□□□ 0.62
KCNA3P22001 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.93■□□□□ 0.62
KCNA3P22001 AL645937.2-201ENST00000396808 931 ntBASIC18.93■□□□□ 0.62
KCNA3P22001 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KCNA3P22001 ISCA2P1-201ENST00000425548 448 ntBASIC18.93■□□□□ 0.62
KCNA3P22001 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC18.93■□□□□ 0.62
KCNA3P22001 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KCNA3P22001 PUDPP3-201ENST00000445368 636 ntBASIC18.93■□□□□ 0.62
KCNA3P22001 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC18.93■□□□□ 0.62
KCNA3P22001 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.93■□□□□ 0.62
KCNA3P22001 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
KCNA3P22001 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KCNA3P22001 AL160314.3-201ENST00000556041 767 ntBASIC18.93■□□□□ 0.62
KCNA3P22001 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KCNA3P22001 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC18.93■□□□□ 0.62
KCNA3P22001 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.93■□□□□ 0.62
KCNA3P22001 MIR6842-201ENST00000612539 65 ntBASIC18.93■□□□□ 0.62
KCNA3P22001 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNA3P22001 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.93■□□□□ 0.62
KCNA3P22001 AL162426.1-201ENST00000624141 743 ntBASIC18.93■□□□□ 0.62
KCNA3P22001 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.93■□□□□ 0.62
KCNA3P22001 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNA3P22001 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KCNA3P22001 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNA3P22001 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNA3P22001 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC18.93■□□□□ 0.62
KCNA3P22001 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
KCNA3P22001 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
KCNA3P22001 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNA3P22001 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
KCNA3P22001 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNA3P22001 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
KCNA3P22001 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNA3P22001 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNA3P22001 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.92■□□□□ 0.62
KCNA3P22001 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
KCNA3P22001 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.92■□□□□ 0.62
KCNA3P22001 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
KCNA3P22001 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KCNA3P22001 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC18.92■□□□□ 0.62
KCNA3P22001 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KCNA3P22001 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KCNA3P22001 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
KCNA3P22001 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KCNA3P22001 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
KCNA3P22001 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KCNA3P22001 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KCNA3P22001 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.92■□□□□ 0.62
KCNA3P22001 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNA3P22001 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNA3P22001 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC18.92■□□□□ 0.62
KCNA3P22001 AL353637.1-201ENST00000451571 732 ntBASIC18.92■□□□□ 0.62
KCNA3P22001 TUBB8P8-201ENST00000458717 1058 ntBASIC18.92■□□□□ 0.62
KCNA3P22001 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC18.92■□□□□ 0.62
KCNA3P22001 IGLV3-15-201ENST00000518356 244 ntBASIC18.92■□□□□ 0.62
KCNA3P22001 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC18.92■□□□□ 0.62
KCNA3P22001 NEU3-205ENST00000531619 582 ntTSL 5 BASIC18.92■□□□□ 0.62
KCNA3P22001 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNA3P22001 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC18.92■□□□□ 0.62
KCNA3P22001 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.92■□□□□ 0.62
KCNA3P22001 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
KCNA3P22001 YRDCP1-201ENST00000621419 643 ntBASIC18.92■□□□□ 0.62
KCNA3P22001 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.92■□□□□ 0.62
KCNA3P22001 AL805961.1-201ENST00000642026 753 ntBASIC18.92■□□□□ 0.62
KCNA3P22001 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
KCNA3P22001 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNA3P22001 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.92■□□□□ 0.62
KCNA3P22001 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNA3P22001 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
KCNA3P22001 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms