Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 AC015818.8-201ENST00000587907 1519 ntBASIC17.3■□□□□ 0.36
SMPD1P17405 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SMPD1P17405 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMPD1P17405 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMPD1P17405 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.3■□□□□ 0.36
SMPD1P17405 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMPD1P17405 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SMPD1P17405 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMPD1P17405 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMPD1P17405 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMPD1P17405 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMPD1P17405 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMPD1P17405 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SMPD1P17405 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SMPD1P17405 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SMPD1P17405 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMPD1P17405 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.29■□□□□ 0.36
SMPD1P17405 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
SMPD1P17405 LTB4R2-202ENST00000528054 3092 ntBASIC17.29■□□□□ 0.36
SMPD1P17405 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMPD1P17405 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMPD1P17405 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMPD1P17405 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SMPD1P17405 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMPD1P17405 AP006547.1-201ENST00000563435 692 ntBASIC17.29■□□□□ 0.36
SMPD1P17405 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.29■□□□□ 0.36
SMPD1P17405 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.29■□□□□ 0.36
SMPD1P17405 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SMPD1P17405 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.29■□□□□ 0.36
SMPD1P17405 AL096828.3-201ENST00000615354 462 ntBASIC17.29■□□□□ 0.36
SMPD1P17405 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMPD1P17405 AL354989.2-201ENST00000435838 1540 ntBASIC17.29■□□□□ 0.36
SMPD1P17405 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMPD1P17405 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMPD1P17405 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMPD1P17405 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMPD1P17405 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMPD1P17405 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SMPD1P17405 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMPD1P17405 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMPD1P17405 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMPD1P17405 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.29■□□□□ 0.36
SMPD1P17405 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMPD1P17405 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.29■□□□□ 0.36
SMPD1P17405 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMPD1P17405 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.29■□□□□ 0.36
SMPD1P17405 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMPD1P17405 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.28■□□□□ 0.36
SMPD1P17405 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMPD1P17405 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMPD1P17405 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.28■□□□□ 0.36
SMPD1P17405 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMPD1P17405 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SMPD1P17405 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMPD1P17405 AC007787.1-201ENST00000588095 1583 ntBASIC17.28■□□□□ 0.36
SMPD1P17405 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMPD1P17405 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMPD1P17405 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMPD1P17405 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.28■□□□□ 0.36
SMPD1P17405 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMPD1P17405 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
SMPD1P17405 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMPD1P17405 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SMPD1P17405 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMPD1P17405 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMPD1P17405 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMPD1P17405 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.28■□□□□ 0.36
SMPD1P17405 AL139094.1-201ENST00000405549 1188 ntBASIC17.28■□□□□ 0.36
SMPD1P17405 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.28■□□□□ 0.36
SMPD1P17405 CALR4P-201ENST00000431943 946 ntBASIC17.28■□□□□ 0.36
SMPD1P17405 CNN2P10-201ENST00000443067 918 ntBASIC17.28■□□□□ 0.36
SMPD1P17405 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.28■□□□□ 0.36
SMPD1P17405 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.28■□□□□ 0.36
SMPD1P17405 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.28■□□□□ 0.36
SMPD1P17405 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.28■□□□□ 0.36
SMPD1P17405 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMPD1P17405 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.28■□□□□ 0.36
SMPD1P17405 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.28■□□□□ 0.36
SMPD1P17405 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMPD1P17405 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMPD1P17405 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMPD1P17405 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMPD1P17405 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMPD1P17405 AC112504.1-201ENST00000623415 1841 ntBASIC17.28■□□□□ 0.36
SMPD1P17405 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.28■□□□□ 0.36
SMPD1P17405 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMPD1P17405 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMPD1P17405 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMPD1P17405 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMPD1P17405 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMPD1P17405 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMPD1P17405 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
SMPD1P17405 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SMPD1P17405 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
SMPD1P17405 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
SMPD1P17405 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SMPD1P17405 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SMPD1P17405 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.27■□□□□ 0.36
SMPD1P17405 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.27■□□□□ 0.36
SMPD1P17405 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms