Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV3P03979 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.43□□□□□ -0.42
TRGV3P03979 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.43□□□□□ -0.42
TRGV3P03979 BASP1P1-201ENST00000430708 665 ntBASIC12.43□□□□□ -0.42
TRGV3P03979 AC092580.3-201ENST00000430932 139 ntBASIC12.43□□□□□ -0.42
TRGV3P03979 EEF1DP4-201ENST00000446006 880 ntBASIC12.43□□□□□ -0.42
TRGV3P03979 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.43□□□□□ -0.42
TRGV3P03979 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.43□□□□□ -0.42
TRGV3P03979 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.43□□□□□ -0.42
TRGV3P03979 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.43□□□□□ -0.42
TRGV3P03979 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
TRGV3P03979 AL033527.5-202ENST00000641632 1098 ntBASIC12.43□□□□□ -0.42
TRGV3P03979 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV3P03979 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV3P03979 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV3P03979 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV3P03979 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC12.43□□□□□ -0.42
TRGV3P03979 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.43□□□□□ -0.42
TRGV3P03979 AC100757.3-201ENST00000622361 1406 ntBASIC12.43□□□□□ -0.42
TRGV3P03979 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV3P03979 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV3P03979 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV3P03979 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV3P03979 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV3P03979 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV3P03979 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV3P03979 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.43□□□□□ -0.42
TRGV3P03979 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
TRGV3P03979 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.42□□□□□ -0.42
TRGV3P03979 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.42□□□□□ -0.42
TRGV3P03979 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV3P03979 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
TRGV3P03979 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.42□□□□□ -0.42
TRGV3P03979 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV3P03979 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.42□□□□□ -0.42
TRGV3P03979 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.42□□□□□ -0.42
TRGV3P03979 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV3P03979 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV3P03979 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV3P03979 SLC9A7P1-201ENST00000554295 3311 ntBASIC12.42□□□□□ -0.42
TRGV3P03979 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV3P03979 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV3P03979 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV3P03979 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
TRGV3P03979 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV3P03979 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV3P03979 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV3P03979 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.42□□□□□ -0.42
TRGV3P03979 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.42□□□□□ -0.42
TRGV3P03979 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.42□□□□□ -0.42
TRGV3P03979 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.42□□□□□ -0.42
TRGV3P03979 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.42□□□□□ -0.42
TRGV3P03979 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV3P03979 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.42□□□□□ -0.42
TRGV3P03979 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.42□□□□□ -0.42
TRGV3P03979 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.42□□□□□ -0.42
TRGV3P03979 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.42□□□□□ -0.42
TRGV3P03979 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.42□□□□□ -0.42
TRGV3P03979 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV3P03979 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV3P03979 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.42□□□□□ -0.42
TRGV3P03979 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
TRGV3P03979 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
TRGV3P03979 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC12.42□□□□□ -0.42
TRGV3P03979 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.42□□□□□ -0.42
TRGV3P03979 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV3P03979 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV3P03979 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.42□□□□□ -0.42
TRGV3P03979 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV3P03979 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV3P03979 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV3P03979 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.42□□□□□ -0.42
TRGV3P03979 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV3P03979 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
TRGV3P03979 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.42□□□□□ -0.42
TRGV3P03979 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV3P03979 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV3P03979 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
TRGV3P03979 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
TRGV3P03979 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.42□□□□□ -0.42
TRGV3P03979 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV3P03979 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV3P03979 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
TRGV3P03979 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.41□□□□□ -0.42
TRGV3P03979 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV3P03979 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TRGV3P03979 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV3P03979 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV3P03979 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV3P03979 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV3P03979 AP005117.1-202ENST00000581724 1908 ntBASIC12.41□□□□□ -0.42
TRGV3P03979 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV3P03979 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV3P03979 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.41□□□□□ -0.42
TRGV3P03979 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV3P03979 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV3P03979 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
TRGV3P03979 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV3P03979 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV3P03979 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms