Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PMPCBO75439 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16■□□□□ 0.15
PMPCBO75439 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PMPCBO75439 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16■□□□□ 0.15
PMPCBO75439 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16■□□□□ 0.15
PMPCBO75439 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PMPCBO75439 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PMPCBO75439 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PMPCBO75439 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16■□□□□ 0.15
PMPCBO75439 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16■□□□□ 0.15
PMPCBO75439 RN7SL618P-201ENST00000477850 296 ntBASIC16■□□□□ 0.15
PMPCBO75439 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16■□□□□ 0.15
PMPCBO75439 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16■□□□□ 0.15
PMPCBO75439 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16■□□□□ 0.15
PMPCBO75439 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16■□□□□ 0.15
PMPCBO75439 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16■□□□□ 0.15
PMPCBO75439 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16■□□□□ 0.15
PMPCBO75439 AC093512.1-201ENST00000617969 520 ntBASIC16■□□□□ 0.15
PMPCBO75439 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PMPCBO75439 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PMPCBO75439 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16■□□□□ 0.15
PMPCBO75439 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
PMPCBO75439 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PMPCBO75439 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
PMPCBO75439 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16■□□□□ 0.15
PMPCBO75439 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16■□□□□ 0.15
PMPCBO75439 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PMPCBO75439 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16■□□□□ 0.15
PMPCBO75439 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PMPCBO75439 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16■□□□□ 0.15
PMPCBO75439 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
PMPCBO75439 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16■□□□□ 0.15
PMPCBO75439 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PMPCBO75439 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PMPCBO75439 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
PMPCBO75439 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16■□□□□ 0.15
PMPCBO75439 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PMPCBO75439 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PMPCBO75439 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.99■□□□□ 0.15
PMPCBO75439 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.99■□□□□ 0.15
PMPCBO75439 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PMPCBO75439 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PMPCBO75439 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.99■□□□□ 0.15
PMPCBO75439 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PMPCBO75439 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PMPCBO75439 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PMPCBO75439 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.99■□□□□ 0.15
PMPCBO75439 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PMPCBO75439 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
PMPCBO75439 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PMPCBO75439 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.99■□□□□ 0.15
PMPCBO75439 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PMPCBO75439 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PMPCBO75439 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PMPCBO75439 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.99■□□□□ 0.15
PMPCBO75439 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.99■□□□□ 0.15
PMPCBO75439 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.99■□□□□ 0.15
PMPCBO75439 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.99■□□□□ 0.15
PMPCBO75439 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PMPCBO75439 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PMPCBO75439 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.99■□□□□ 0.15
PMPCBO75439 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.99■□□□□ 0.15
PMPCBO75439 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.99■□□□□ 0.15
PMPCBO75439 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PMPCBO75439 AL158211.3-201ENST00000607385 239 ntBASIC15.99■□□□□ 0.15
PMPCBO75439 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.99■□□□□ 0.15
PMPCBO75439 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PMPCBO75439 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PMPCBO75439 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PMPCBO75439 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PMPCBO75439 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PMPCBO75439 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PMPCBO75439 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PMPCBO75439 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.99■□□□□ 0.15
PMPCBO75439 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PMPCBO75439 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PMPCBO75439 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
PMPCBO75439 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PMPCBO75439 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PMPCBO75439 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMPCBO75439 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PMPCBO75439 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.98■□□□□ 0.15
PMPCBO75439 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PMPCBO75439 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMPCBO75439 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.98■□□□□ 0.15
PMPCBO75439 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PMPCBO75439 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
PMPCBO75439 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.98■□□□□ 0.15
PMPCBO75439 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMPCBO75439 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMPCBO75439 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMPCBO75439 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMPCBO75439 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PMPCBO75439 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMPCBO75439 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.98■□□□□ 0.15
PMPCBO75439 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.98■□□□□ 0.15
PMPCBO75439 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMPCBO75439 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.98■□□□□ 0.15
PMPCBO75439 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PMPCBO75439 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms