Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC14.03□□□□□ -0.16
PFDN1O60925 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN1O60925 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN1O60925 AC102953.2-201ENST00000609755 3026 ntBASIC14.03□□□□□ -0.16
PFDN1O60925 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PFDN1O60925 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN1O60925 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN1O60925 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PFDN1O60925 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN1O60925 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN1O60925 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN1O60925 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
PFDN1O60925 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC14.02□□□□□ -0.16
PFDN1O60925 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN1O60925 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN1O60925 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN1O60925 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.02□□□□□ -0.16
PFDN1O60925 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN1O60925 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN1O60925 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN1O60925 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN1O60925 AP001267.2-201ENST00000532619 2086 ntBASIC14.02□□□□□ -0.16
PFDN1O60925 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN1O60925 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN1O60925 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN1O60925 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PFDN1O60925 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.02□□□□□ -0.16
PFDN1O60925 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN1O60925 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PFDN1O60925 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC14.02□□□□□ -0.17
PFDN1O60925 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PFDN1O60925 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PFDN1O60925 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
PFDN1O60925 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PFDN1O60925 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
PFDN1O60925 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PFDN1O60925 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PFDN1O60925 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
PFDN1O60925 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
PFDN1O60925 AC004945.1-201ENST00000416738 983 ntBASIC14.02□□□□□ -0.17
PFDN1O60925 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
PFDN1O60925 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.02□□□□□ -0.17
PFDN1O60925 AC091874.3-201ENST00000512672 1195 ntBASIC14.02□□□□□ -0.17
PFDN1O60925 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC14.02□□□□□ -0.17
PFDN1O60925 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC14.02□□□□□ -0.17
PFDN1O60925 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
PFDN1O60925 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC14.02□□□□□ -0.17
PFDN1O60925 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PFDN1O60925 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
PFDN1O60925 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC14.02□□□□□ -0.17
PFDN1O60925 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
PFDN1O60925 AC092053.3-201ENST00000641308 4975 ntBASIC14.02□□□□□ -0.17
PFDN1O60925 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PFDN1O60925 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PFDN1O60925 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
PFDN1O60925 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PFDN1O60925 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PFDN1O60925 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
PFDN1O60925 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.02□□□□□ -0.17
PFDN1O60925 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
PFDN1O60925 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PFDN1O60925 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PFDN1O60925 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PFDN1O60925 AC073548.1-201ENST00000624088 1882 ntBASIC14.01□□□□□ -0.17
PFDN1O60925 AC073957.3-201ENST00000609998 6758 ntBASIC14.01□□□□□ -0.17
PFDN1O60925 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.01□□□□□ -0.17
PFDN1O60925 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PFDN1O60925 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.01□□□□□ -0.17
PFDN1O60925 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.01□□□□□ -0.17
PFDN1O60925 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PFDN1O60925 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.01□□□□□ -0.17
PFDN1O60925 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PFDN1O60925 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PFDN1O60925 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PFDN1O60925 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PFDN1O60925 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PFDN1O60925 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.01□□□□□ -0.17
PFDN1O60925 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PFDN1O60925 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.01□□□□□ -0.17
PFDN1O60925 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PFDN1O60925 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PFDN1O60925 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
PFDN1O60925 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.01□□□□□ -0.17
PFDN1O60925 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PFDN1O60925 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC14.01□□□□□ -0.17
PFDN1O60925 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PFDN1O60925 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.01□□□□□ -0.17
PFDN1O60925 AC006015.1-201ENST00000429970 570 ntBASIC14.01□□□□□ -0.17
PFDN1O60925 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.01□□□□□ -0.17
PFDN1O60925 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PFDN1O60925 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC14.01□□□□□ -0.17
PFDN1O60925 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC14.01□□□□□ -0.17
PFDN1O60925 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
PFDN1O60925 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.01□□□□□ -0.17
PFDN1O60925 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
PFDN1O60925 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PFDN1O60925 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PFDN1O60925 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
PFDN1O60925 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PFDN1O60925 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms