Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HCN1O60741 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.78□□□□□ -0.04
HCN1O60741 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.78□□□□□ -0.04
HCN1O60741 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HCN1O60741 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HCN1O60741 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HCN1O60741 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HCN1O60741 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HCN1O60741 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.78□□□□□ -0.04
HCN1O60741 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.78□□□□□ -0.04
HCN1O60741 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.78□□□□□ -0.04
HCN1O60741 HLA-V-204ENST00000476601 1289 ntBASIC14.78□□□□□ -0.04
HCN1O60741 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.78□□□□□ -0.04
HCN1O60741 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HCN1O60741 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.78□□□□□ -0.04
HCN1O60741 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.78□□□□□ -0.04
HCN1O60741 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.78□□□□□ -0.04
HCN1O60741 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HCN1O60741 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HCN1O60741 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
HCN1O60741 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.78□□□□□ -0.04
HCN1O60741 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HCN1O60741 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HCN1O60741 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HCN1O60741 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HCN1O60741 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HCN1O60741 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HCN1O60741 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HCN1O60741 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.78□□□□□ -0.04
HCN1O60741 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HCN1O60741 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.78□□□□□ -0.04
HCN1O60741 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.78□□□□□ -0.04
HCN1O60741 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HCN1O60741 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HCN1O60741 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HCN1O60741 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.77□□□□□ -0.04
HCN1O60741 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.77□□□□□ -0.04
HCN1O60741 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HCN1O60741 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
HCN1O60741 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.77□□□□□ -0.04
HCN1O60741 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
HCN1O60741 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HCN1O60741 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
HCN1O60741 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
HCN1O60741 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
HCN1O60741 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
HCN1O60741 PCDHA3-202ENST00000532566 4594 ntBASIC14.77□□□□□ -0.04
HCN1O60741 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.77□□□□□ -0.05
HCN1O60741 AC092580.3-201ENST00000430932 139 ntBASIC14.77□□□□□ -0.05
HCN1O60741 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HCN1O60741 AC027369.6-201ENST00000525520 931 ntBASIC14.77□□□□□ -0.05
HCN1O60741 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HCN1O60741 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.77□□□□□ -0.05
HCN1O60741 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.77□□□□□ -0.05
HCN1O60741 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.77□□□□□ -0.05
HCN1O60741 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HCN1O60741 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.77□□□□□ -0.05
HCN1O60741 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.77□□□□□ -0.05
HCN1O60741 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HCN1O60741 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HCN1O60741 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
HCN1O60741 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
HCN1O60741 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
HCN1O60741 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
HCN1O60741 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
HCN1O60741 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.76□□□□□ -0.05
HCN1O60741 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
HCN1O60741 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
HCN1O60741 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HCN1O60741 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HCN1O60741 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
HCN1O60741 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HCN1O60741 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.76□□□□□ -0.05
HCN1O60741 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HCN1O60741 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
HCN1O60741 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HCN1O60741 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HCN1O60741 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HCN1O60741 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HCN1O60741 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.76□□□□□ -0.05
HCN1O60741 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HCN1O60741 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.76□□□□□ -0.05
HCN1O60741 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HCN1O60741 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HCN1O60741 HAUS4P1-201ENST00000406739 1145 ntBASIC14.76□□□□□ -0.05
HCN1O60741 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HCN1O60741 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HCN1O60741 FAM207CP-201ENST00000443486 507 ntBASIC14.76□□□□□ -0.05
HCN1O60741 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
HCN1O60741 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.76□□□□□ -0.05
HCN1O60741 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.76□□□□□ -0.05
HCN1O60741 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.76□□□□□ -0.05
HCN1O60741 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.76□□□□□ -0.05
HCN1O60741 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.76□□□□□ -0.05
HCN1O60741 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HCN1O60741 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.76□□□□□ -0.05
HCN1O60741 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.76□□□□□ -0.05
HCN1O60741 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
HCN1O60741 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
HCN1O60741 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms