Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC11.86□□□□□ -0.51
SNAI2O43623 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SNAI2O43623 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
SNAI2O43623 LINC00552-201ENST00000625151 2579 ntBASIC11.86□□□□□ -0.51
SNAI2O43623 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SNAI2O43623 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC11.86□□□□□ -0.51
SNAI2O43623 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC11.86□□□□□ -0.51
SNAI2O43623 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SNAI2O43623 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SNAI2O43623 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
SNAI2O43623 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC11.86□□□□□ -0.51
SNAI2O43623 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SNAI2O43623 RELA-227ENST00000615805 2236 ntTSL 5 BASIC11.86□□□□□ -0.51
SNAI2O43623 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SNAI2O43623 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SNAI2O43623 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SNAI2O43623 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SNAI2O43623 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC11.86□□□□□ -0.51
SNAI2O43623 RNU1-129P-201ENST00000384064 167 ntBASIC11.86□□□□□ -0.51
SNAI2O43623 LSM5-204ENST00000409909 740 ntTSL 2 BASIC11.86□□□□□ -0.51
SNAI2O43623 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
SNAI2O43623 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SNAI2O43623 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11.86□□□□□ -0.51
SNAI2O43623 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
SNAI2O43623 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC11.86□□□□□ -0.51
SNAI2O43623 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC11.86□□□□□ -0.51
SNAI2O43623 U1.21-201ENST00000580816 167 ntBASIC11.86□□□□□ -0.51
SNAI2O43623 AC008608.2-201ENST00000606089 416 ntBASIC11.86□□□□□ -0.51
SNAI2O43623 AL365330.1-201ENST00000607459 531 ntBASIC11.86□□□□□ -0.51
SNAI2O43623 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
SNAI2O43623 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC11.86□□□□□ -0.51
SNAI2O43623 HADH-212ENST00000638621 741 ntTSL 5 BASIC11.86□□□□□ -0.51
SNAI2O43623 AC107918.4-202ENST00000641623 219 ntBASIC11.86□□□□□ -0.51
SNAI2O43623 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SNAI2O43623 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC11.86□□□□□ -0.51
SNAI2O43623 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC11.86□□□□□ -0.51
SNAI2O43623 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SNAI2O43623 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SNAI2O43623 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
SNAI2O43623 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SNAI2O43623 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
SNAI2O43623 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SNAI2O43623 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SNAI2O43623 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SNAI2O43623 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SNAI2O43623 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
SNAI2O43623 CICP23-201ENST00000605013 2741 ntBASIC11.86□□□□□ -0.51
SNAI2O43623 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SNAI2O43623 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
SNAI2O43623 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SNAI2O43623 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC11.85□□□□□ -0.51
SNAI2O43623 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
SNAI2O43623 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SNAI2O43623 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC11.85□□□□□ -0.51
SNAI2O43623 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SNAI2O43623 AC005252.3-201ENST00000623855 2258 ntBASIC11.85□□□□□ -0.51
SNAI2O43623 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
SNAI2O43623 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC11.85□□□□□ -0.51
SNAI2O43623 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SNAI2O43623 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
SNAI2O43623 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC11.85□□□□□ -0.51
SNAI2O43623 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
SNAI2O43623 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SNAI2O43623 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC11.85□□□□□ -0.51
SNAI2O43623 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SNAI2O43623 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC11.85□□□□□ -0.51
SNAI2O43623 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
SNAI2O43623 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC11.85□□□□□ -0.51
SNAI2O43623 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
SNAI2O43623 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC11.85□□□□□ -0.51
SNAI2O43623 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SNAI2O43623 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SNAI2O43623 KRT18P27-201ENST00000427733 1299 ntBASIC11.85□□□□□ -0.51
SNAI2O43623 AC093724.1-201ENST00000448659 1027 ntBASIC11.85□□□□□ -0.51
SNAI2O43623 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
SNAI2O43623 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SNAI2O43623 FOSL1P1-201ENST00000511041 816 ntBASIC11.85□□□□□ -0.51
SNAI2O43623 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SNAI2O43623 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SNAI2O43623 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SNAI2O43623 CIPC-205ENST00000555437 566 ntTSL 3 BASIC11.85□□□□□ -0.51
SNAI2O43623 AC087388.1-201ENST00000571370 1112 ntBASIC11.85□□□□□ -0.51
SNAI2O43623 MIR4515-201ENST00000584082 81 ntBASIC11.85□□□□□ -0.51
SNAI2O43623 AL031055.1-201ENST00000606362 631 ntBASIC11.85□□□□□ -0.51
SNAI2O43623 AC008667.4-201ENST00000607370 168 ntBASIC11.85□□□□□ -0.51
SNAI2O43623 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SNAI2O43623 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SNAI2O43623 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SNAI2O43623 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC11.85□□□□□ -0.51
SNAI2O43623 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC11.85□□□□□ -0.51
SNAI2O43623 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SNAI2O43623 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SNAI2O43623 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SNAI2O43623 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SNAI2O43623 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SNAI2O43623 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SNAI2O43623 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC11.85□□□□□ -0.51
SNAI2O43623 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC11.85□□□□□ -0.51
SNAI2O43623 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SNAI2O43623 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms