Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.07■□□□□ 0
NDUFS4O43181 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
NDUFS4O43181 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.07■□□□□ 0
NDUFS4O43181 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.07■□□□□ 0
NDUFS4O43181 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.07■□□□□ 0
NDUFS4O43181 LINC01115-203ENST00000606068 577 ntBASIC15.07■□□□□ 0
NDUFS4O43181 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.07■□□□□ 0
NDUFS4O43181 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.07■□□□□ 0
NDUFS4O43181 AC127383.1-201ENST00000444697 1800 ntBASIC15.07■□□□□ 0
NDUFS4O43181 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFS4O43181 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.07■□□□□ 0
NDUFS4O43181 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.07■□□□□ 0
NDUFS4O43181 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFS4O43181 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFS4O43181 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.07■□□□□ 0
NDUFS4O43181 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.07■□□□□ 0
NDUFS4O43181 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.07■□□□□ 0
NDUFS4O43181 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.07■□□□□ 0
NDUFS4O43181 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.07■□□□□ 0
NDUFS4O43181 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFS4O43181 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.06■□□□□ 0
NDUFS4O43181 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.06■□□□□ 0
NDUFS4O43181 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.06■□□□□ 0
NDUFS4O43181 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFS4O43181 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.06■□□□□ 0
NDUFS4O43181 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NDUFS4O43181 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NDUFS4O43181 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.06■□□□□ 0
NDUFS4O43181 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.06■□□□□ 0
NDUFS4O43181 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFS4O43181 AC087481.3-201ENST00000602886 1894 ntBASIC15.06■□□□□ 0
NDUFS4O43181 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NDUFS4O43181 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NDUFS4O43181 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
NDUFS4O43181 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFS4O43181 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFS4O43181 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFS4O43181 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.06■□□□□ 0
NDUFS4O43181 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.06■□□□□ 0
NDUFS4O43181 MRPS18AP1-201ENST00000414458 589 ntBASIC15.06■□□□□ 0
NDUFS4O43181 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.06■□□□□ 0
NDUFS4O43181 FAM8A3P-201ENST00000427218 844 ntBASIC15.06■□□□□ 0
NDUFS4O43181 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.06■□□□□ 0
NDUFS4O43181 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.06■□□□□ 0
NDUFS4O43181 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.06■□□□□ 0
NDUFS4O43181 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFS4O43181 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.06■□□□□ 0
NDUFS4O43181 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFS4O43181 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.06■□□□□ 0
NDUFS4O43181 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.06■□□□□ 0
NDUFS4O43181 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.06■□□□□ 0
NDUFS4O43181 AC004461.2-201ENST00000629517 803 ntBASIC15.06■□□□□ 0
NDUFS4O43181 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.06■□□□□ 0
NDUFS4O43181 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
NDUFS4O43181 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.06■□□□□ 0
NDUFS4O43181 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFS4O43181 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFS4O43181 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFS4O43181 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFS4O43181 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.06■□□□□ 0
NDUFS4O43181 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.06■□□□□ 0
NDUFS4O43181 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.06■□□□□ 0
NDUFS4O43181 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.06■□□□□ 0
NDUFS4O43181 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.06■□□□□ 0
NDUFS4O43181 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.06■□□□□ 0
NDUFS4O43181 AC090616.6-203ENST00000579186 1945 ntBASIC15.05■□□□□ 0
NDUFS4O43181 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
NDUFS4O43181 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
NDUFS4O43181 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.05■□□□□ 0
NDUFS4O43181 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
NDUFS4O43181 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NDUFS4O43181 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NDUFS4O43181 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NDUFS4O43181 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NDUFS4O43181 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
NDUFS4O43181 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
NDUFS4O43181 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
NDUFS4O43181 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.05■□□□□ -0
NDUFS4O43181 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NDUFS4O43181 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.05■□□□□ -0
NDUFS4O43181 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NDUFS4O43181 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
NDUFS4O43181 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.05■□□□□ -0
NDUFS4O43181 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.05■□□□□ -0
NDUFS4O43181 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
NDUFS4O43181 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
NDUFS4O43181 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.05■□□□□ -0
NDUFS4O43181 AC114501.2-201ENST00000439631 535 ntBASIC15.05■□□□□ -0
NDUFS4O43181 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.05■□□□□ -0
NDUFS4O43181 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.05■□□□□ -0
NDUFS4O43181 UGT1A2P-201ENST00000454886 866 ntBASIC15.05■□□□□ -0
NDUFS4O43181 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.05■□□□□ -0
NDUFS4O43181 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.05■□□□□ -0
NDUFS4O43181 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.05■□□□□ -0
NDUFS4O43181 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.05■□□□□ -0
NDUFS4O43181 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.05■□□□□ -0
NDUFS4O43181 TIMM17BP1-201ENST00000545713 516 ntBASIC15.05■□□□□ -0
NDUFS4O43181 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.05■□□□□ -0
NDUFS4O43181 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.05■□□□□ -0
NDUFS4O43181 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms