Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.2□□□□□ -0.3
TRBV6-7A0A0A0MS04 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 FAM220BP-201ENST00000377689 816 ntBASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 AC142381.1-201ENST00000426099 345 ntBASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 AC027307.2-201ENST00000591252 911 ntBASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.19□□□□□ -0.3
TRBV6-7A0A0A0MS04 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 AL355306.1-201ENST00000415580 579 ntBASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 TPM4P1-201ENST00000436100 807 ntBASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 RNA5SP410-201ENST00000516285 106 ntBASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 AL135744.1-201ENST00000565098 629 ntBASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 AL450472.2-201ENST00000603663 1156 ntBASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 AC092865.6-201ENST00000642101 219 ntBASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 AC007686.3-201ENST00000619017 3487 ntBASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 AL136982.4-201ENST00000437689 1740 ntBASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms