Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 CLK3P2-201ENST00000427566 1453 ntBASIC17.01■□□□□ 0.31
USP15Q9Y4E8 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 AC092933.1-201ENST00000393644 945 ntBASIC17.01■□□□□ 0.31
USP15Q9Y4E8 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 HAUS4P1-201ENST00000406739 1145 ntBASIC17.01■□□□□ 0.31
USP15Q9Y4E8 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 USP32P1-208ENST00000506594 1164 ntBASIC17.01■□□□□ 0.31
USP15Q9Y4E8 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 AC092337.1-201ENST00000568699 1129 ntBASIC17.01■□□□□ 0.31
USP15Q9Y4E8 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 AC061975.2-201ENST00000581722 295 ntBASIC17.01■□□□□ 0.31
USP15Q9Y4E8 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP15Q9Y4E8 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17■□□□□ 0.31
USP15Q9Y4E8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 AC006277.1-201ENST00000624348 1610 ntBASIC17■□□□□ 0.31
USP15Q9Y4E8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17■□□□□ 0.31
USP15Q9Y4E8 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
USP15Q9Y4E8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
USP15Q9Y4E8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
USP15Q9Y4E8 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
USP15Q9Y4E8 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17■□□□□ 0.31
USP15Q9Y4E8 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17■□□□□ 0.31
USP15Q9Y4E8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
USP15Q9Y4E8 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17■□□□□ 0.31
USP15Q9Y4E8 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17■□□□□ 0.31
USP15Q9Y4E8 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
USP15Q9Y4E8 AL583810.1-201ENST00000553344 1045 ntBASIC17■□□□□ 0.31
USP15Q9Y4E8 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17■□□□□ 0.31
USP15Q9Y4E8 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17■□□□□ 0.31
USP15Q9Y4E8 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17■□□□□ 0.31
USP15Q9Y4E8 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17■□□□□ 0.31
USP15Q9Y4E8 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17■□□□□ 0.31
USP15Q9Y4E8 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
USP15Q9Y4E8 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17■□□□□ 0.31
USP15Q9Y4E8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP15Q9Y4E8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17■□□□□ 0.31
USP15Q9Y4E8 LINC02228-204ENST00000642115 2962 ntBASIC17■□□□□ 0.31
USP15Q9Y4E8 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
USP15Q9Y4E8 AC018665.1-201ENST00000622927 1362 ntBASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms