Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 AC140479.7-201ENST00000636301 2332 ntBASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.95□□□□□ -0.34
RCL1Q9Y2P8 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 RN7SL850P-201ENST00000579959 291 ntBASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 MIR4321-201ENST00000592276 80 ntBASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.94□□□□□ -0.34
RCL1Q9Y2P8 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.93□□□□□ -0.34
RCL1Q9Y2P8 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms