Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
NINLQ9Y2I6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC21.3■■□□□ 1
NINLQ9Y2I6 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
NINLQ9Y2I6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
NINLQ9Y2I6 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC21.3■■□□□ 1
NINLQ9Y2I6 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
NINLQ9Y2I6 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NINLQ9Y2I6 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC21.3■■□□□ 1
NINLQ9Y2I6 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
NINLQ9Y2I6 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC21.3■■□□□ 1
NINLQ9Y2I6 NUS1P3-201ENST00000423502 862 ntBASIC21.3■■□□□ 1
NINLQ9Y2I6 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC21.3■■□□□ 1
NINLQ9Y2I6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC21.3■■□□□ 1
NINLQ9Y2I6 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
NINLQ9Y2I6 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC21.3■■□□□ 1
NINLQ9Y2I6 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC21.3■■□□□ 1
NINLQ9Y2I6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC21.3■■□□□ 1
NINLQ9Y2I6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NINLQ9Y2I6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NINLQ9Y2I6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC21.3■■□□□ 1
NINLQ9Y2I6 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC21.29■■□□□ 1
NINLQ9Y2I6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
NINLQ9Y2I6 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC21.29■■□□□ 1
NINLQ9Y2I6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NINLQ9Y2I6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC21.29■■□□□ 1
NINLQ9Y2I6 RNU1-114P-201ENST00000365297 166 ntBASIC21.29■■□□□ 1
NINLQ9Y2I6 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC21.29■■□□□ 1
NINLQ9Y2I6 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC21.29■■□□□ 1
NINLQ9Y2I6 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NINLQ9Y2I6 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
NINLQ9Y2I6 AC099336.1-201ENST00000417053 1171 ntBASIC21.29■■□□□ 1
NINLQ9Y2I6 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC21.29■■□□□ 1
NINLQ9Y2I6 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC21.29■■□□□ 1
NINLQ9Y2I6 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
NINLQ9Y2I6 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
NINLQ9Y2I6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC21.29■■□□□ 1
NINLQ9Y2I6 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC21.29■■□□□ 1
NINLQ9Y2I6 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC21.29■■□□□ 1
NINLQ9Y2I6 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC21.29■■□□□ 1
NINLQ9Y2I6 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC21.29■■□□□ 1
NINLQ9Y2I6 TECR-220ENST00000600083 1204 ntTSL 2 BASIC21.29■■□□□ 1
NINLQ9Y2I6 PPA1-206ENST00000625364 644 ntTSL 5 BASIC21.29■■□□□ 1
NINLQ9Y2I6 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC21.29■■□□□ 1
NINLQ9Y2I6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC21.29■■□□□ 1
NINLQ9Y2I6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
NINLQ9Y2I6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NINLQ9Y2I6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC21.29■■□□□ 1
NINLQ9Y2I6 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NINLQ9Y2I6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
NINLQ9Y2I6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
NINLQ9Y2I6 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
NINLQ9Y2I6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NINLQ9Y2I6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
NINLQ9Y2I6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC21.29■■□□□ 1
NINLQ9Y2I6 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
NINLQ9Y2I6 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC21.29■■□□□ 1
NINLQ9Y2I6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NINLQ9Y2I6 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NINLQ9Y2I6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC21.28■■□□□ 1
NINLQ9Y2I6 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NINLQ9Y2I6 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NINLQ9Y2I6 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC21.28■■□□□ 1
NINLQ9Y2I6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NINLQ9Y2I6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NINLQ9Y2I6 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NINLQ9Y2I6 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
NINLQ9Y2I6 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC21.28■■□□□ 1
NINLQ9Y2I6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
NINLQ9Y2I6 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NINLQ9Y2I6 CNN2P8-201ENST00000421872 913 ntBASIC21.28■■□□□ 1
NINLQ9Y2I6 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC21.28■■□□□ 1
NINLQ9Y2I6 AC016694.1-201ENST00000434179 700 ntBASIC21.28■■□□□ 1
NINLQ9Y2I6 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC21.28■■□□□ 1
NINLQ9Y2I6 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC21.28■■□□□ 1
NINLQ9Y2I6 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC21.28■■□□□ 1
NINLQ9Y2I6 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC21.28■■□□□ 1
NINLQ9Y2I6 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC21.28■■□□□ 1
NINLQ9Y2I6 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC21.28■■□□□ 1
NINLQ9Y2I6 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC21.28■■□□□ 1
NINLQ9Y2I6 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC21.28■■□□□ 1
NINLQ9Y2I6 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC21.28■■□□□ 1
NINLQ9Y2I6 AC079316.1-201ENST00000548397 411 ntBASIC21.28■■□□□ 1
NINLQ9Y2I6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC21.28■■□□□ 1
NINLQ9Y2I6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
NINLQ9Y2I6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC21.28■■□□□ 1
NINLQ9Y2I6 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
NINLQ9Y2I6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC21.28■■□□□ 1
NINLQ9Y2I6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NINLQ9Y2I6 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
NINLQ9Y2I6 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NINLQ9Y2I6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC21.27■■□□□ 1
NINLQ9Y2I6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NINLQ9Y2I6 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NINLQ9Y2I6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NINLQ9Y2I6 AL138709.1-201ENST00000614840 1693 ntBASIC21.27■■□□□ 1
NINLQ9Y2I6 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NINLQ9Y2I6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NINLQ9Y2I6 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
NINLQ9Y2I6 KRT8P35-201ENST00000483942 1338 ntBASIC21.27■■□□□ 1
NINLQ9Y2I6 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms