Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 AC041040.2-201ENST00000622926 2899 ntBASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 TMBIM7P-203ENST00000641617 1718 ntBASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 RNA5SP419-201ENST00000515908 135 ntBASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PCDHGB4Q9UN71 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 WASH6P-202ENST00000359512 1437 ntBASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 AC073439.1-201ENST00000624121 1774 ntBASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 AC008677.1-201ENST00000519230 1561 ntBASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 SLC25A6P4-201ENST00000586535 553 ntBASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 AC064836.3-201ENST00000607928 673 ntBASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB4Q9UN71 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms