Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 FAM21FP-201ENST00000426241 1131 ntBASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 RNA5SP486-201ENST00000515961 83 ntBASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 AC105250.1-201ENST00000509378 2057 ntBASIC17.91■□□□□ 0.46
SYNPO2Q9UMS6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 YBX1P6-201ENST00000442962 1002 ntBASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 AC023310.1-201ENST00000554836 735 ntBASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 AL158070.2-201ENST00000623713 1621 ntBASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
SYNPO2Q9UMS6 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
SYNPO2Q9UMS6 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPO2Q9UMS6 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms