Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLN8Q9UBY8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 AL080243.2-201ENST00000418783 582 ntBASIC13.37□□□□□ -0.27
CLN8Q9UBY8 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 RN7SL618P-201ENST00000477850 296 ntBASIC13.37□□□□□ -0.27
CLN8Q9UBY8 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.37□□□□□ -0.27
CLN8Q9UBY8 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 AC087499.5-201ENST00000452760 1342 ntBASIC13.37□□□□□ -0.27
CLN8Q9UBY8 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 TCAF2P1-201ENST00000291129 2421 ntBASIC13.37□□□□□ -0.27
CLN8Q9UBY8 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLN8Q9UBY8 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 C8orf49-201ENST00000525043 1968 ntBASIC13.36□□□□□ -0.27
CLN8Q9UBY8 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 KRT8P12-202ENST00000472924 1397 ntBASIC13.36□□□□□ -0.27
CLN8Q9UBY8 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 MIR4745-201ENST00000577608 62 ntBASIC13.36□□□□□ -0.27
CLN8Q9UBY8 MIR6069-201ENST00000620069 79 ntBASIC13.36□□□□□ -0.27
CLN8Q9UBY8 AP005117.1-202ENST00000581724 1908 ntBASIC13.36□□□□□ -0.27
CLN8Q9UBY8 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 AC073347.1-201ENST00000421633 2643 ntBASIC13.36□□□□□ -0.27
CLN8Q9UBY8 CYP4F24P-201ENST00000586049 1580 ntBASIC13.36□□□□□ -0.27
CLN8Q9UBY8 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.36□□□□□ -0.27
CLN8Q9UBY8 AP001282.1-201ENST00000531301 1499 ntBASIC13.36□□□□□ -0.27
CLN8Q9UBY8 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.35□□□□□ -0.27
CLN8Q9UBY8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms