Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 AL035456.1-201ENST00000456064 1369 ntBASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 AC136604.1-201ENST00000418535 575 ntBASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 AC004835.2-201ENST00000603762 682 ntBASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NEUROD4Q9HD90 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 AC138035.3-201ENST00000622706 2791 ntBASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 AC004461.1-201ENST00000412461 403 ntBASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 AC004449.1-201ENST00000564240 433 ntBASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 AC105021.1-202ENST00000570572 669 ntBASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 AC007967.4-201ENST00000614700 386 ntBASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.9□□□□□ -0.02
NEUROD4Q9HD90 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NEUROD4Q9HD90 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.89□□□□□ -0.03
NEUROD4Q9HD90 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NEUROD4Q9HD90 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.89□□□□□ -0.03
NEUROD4Q9HD90 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NEUROD4Q9HD90 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NEUROD4Q9HD90 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms