Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 RPS8P6-201ENST00000426177 609 ntBASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 MKNK2P1-201ENST00000437526 628 ntBASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 AP001160.2-201ENST00000596071 487 ntBASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 AC068137.2-201ENST00000605408 478 ntBASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 C20orf181-201ENST00000623918 480 ntBASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 AJ011931.1-201ENST00000618749 2492 ntBASIC14.77□□□□□ -0.04
AMBRA1Q9C0C7 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
AMBRA1Q9C0C7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
AMBRA1Q9C0C7 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
AMBRA1Q9C0C7 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.77□□□□□ -0.04
AMBRA1Q9C0C7 BNIP3P1-202ENST00000550043 1585 ntBASIC14.77□□□□□ -0.04
AMBRA1Q9C0C7 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.77□□□□□ -0.04
AMBRA1Q9C0C7 AC126365.1-201ENST00000578585 1514 ntBASIC14.77□□□□□ -0.04
AMBRA1Q9C0C7 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AMBRA1Q9C0C7 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AMBRA1Q9C0C7 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.77□□□□□ -0.04
AMBRA1Q9C0C7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AMBRA1Q9C0C7 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AMBRA1Q9C0C7 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
AMBRA1Q9C0C7 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AMBRA1Q9C0C7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.77□□□□□ -0.04
AMBRA1Q9C0C7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
AMBRA1Q9C0C7 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.77□□□□□ -0.04
AMBRA1Q9C0C7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.77□□□□□ -0.04
AMBRA1Q9C0C7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AMBRA1Q9C0C7 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AMBRA1Q9C0C7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.77□□□□□ -0.05
AMBRA1Q9C0C7 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.77□□□□□ -0.05
AMBRA1Q9C0C7 YBX1P5-201ENST00000509441 847 ntBASIC14.77□□□□□ -0.05
AMBRA1Q9C0C7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.77□□□□□ -0.05
AMBRA1Q9C0C7 AL138918.1-201ENST00000568306 659 ntBASIC14.77□□□□□ -0.05
AMBRA1Q9C0C7 MIR4313-201ENST00000580760 101 ntBASIC14.77□□□□□ -0.05
AMBRA1Q9C0C7 AC061975.2-201ENST00000581722 295 ntBASIC14.77□□□□□ -0.05
AMBRA1Q9C0C7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.77□□□□□ -0.05
AMBRA1Q9C0C7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.77□□□□□ -0.05
AMBRA1Q9C0C7 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AMBRA1Q9C0C7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AMBRA1Q9C0C7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
AMBRA1Q9C0C7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
AMBRA1Q9C0C7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.77□□□□□ -0.05
AMBRA1Q9C0C7 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AMBRA1Q9C0C7 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
AMBRA1Q9C0C7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AMBRA1Q9C0C7 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.77□□□□□ -0.05
AMBRA1Q9C0C7 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AMBRA1Q9C0C7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AMBRA1Q9C0C7 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
AMBRA1Q9C0C7 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AMBRA1Q9C0C7 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AMBRA1Q9C0C7 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AMBRA1Q9C0C7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.77□□□□□ -0.05
AMBRA1Q9C0C7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AMBRA1Q9C0C7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
AMBRA1Q9C0C7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AMBRA1Q9C0C7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
AMBRA1Q9C0C7 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AMBRA1Q9C0C7 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
AMBRA1Q9C0C7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AMBRA1Q9C0C7 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.76□□□□□ -0.05
AMBRA1Q9C0C7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AMBRA1Q9C0C7 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.76□□□□□ -0.05
AMBRA1Q9C0C7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AMBRA1Q9C0C7 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AMBRA1Q9C0C7 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
AMBRA1Q9C0C7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AMBRA1Q9C0C7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AMBRA1Q9C0C7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AMBRA1Q9C0C7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.76□□□□□ -0.05
AMBRA1Q9C0C7 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AMBRA1Q9C0C7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.76□□□□□ -0.05
AMBRA1Q9C0C7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms