Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP3Q9BWW4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 AC022188.1-201ENST00000620960 1664 ntBASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 AC023824.1-201ENST00000562945 2975 ntBASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 AP002414.2-201ENST00000591780 3365 ntBASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 PHKG1P2-201ENST00000457537 863 ntBASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 AC055876.2-201ENST00000531834 546 ntBASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 AC140912.1-201ENST00000577171 1054 ntBASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 SPDYE22P-201ENST00000582158 798 ntBASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP3Q9BWW4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 MST1L-201ENST00000442552 2185 ntBASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 AC092337.1-201ENST00000568699 1129 ntBASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP3Q9BWW4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms