Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
VRK1Q99986 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 AC104581.4-201ENST00000623126 3052 ntBASIC14.01□□□□□ -0.17
VRK1Q99986 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
VRK1Q99986 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.01□□□□□ -0.17
VRK1Q99986 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
VRK1Q99986 AC142381.1-201ENST00000426099 345 ntBASIC14.01□□□□□ -0.17
VRK1Q99986 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.01□□□□□ -0.17
VRK1Q99986 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.01□□□□□ -0.17
VRK1Q99986 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
VRK1Q99986 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 RNA5SP410-201ENST00000516285 106 ntBASIC14.01□□□□□ -0.17
VRK1Q99986 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.01□□□□□ -0.17
VRK1Q99986 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.01□□□□□ -0.17
VRK1Q99986 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.01□□□□□ -0.17
VRK1Q99986 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.01□□□□□ -0.17
VRK1Q99986 MIR4745-201ENST00000577608 62 ntBASIC14.01□□□□□ -0.17
VRK1Q99986 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.01□□□□□ -0.17
VRK1Q99986 AL390955.2-201ENST00000603032 514 ntBASIC14.01□□□□□ -0.17
VRK1Q99986 SPTSSB-204ENST00000617024 1292 ntBASIC14.01□□□□□ -0.17
VRK1Q99986 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.01□□□□□ -0.17
VRK1Q99986 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.01□□□□□ -0.17
VRK1Q99986 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
VRK1Q99986 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.01□□□□□ -0.17
VRK1Q99986 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.01□□□□□ -0.17
VRK1Q99986 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VRK1Q99986 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
VRK1Q99986 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
VRK1Q99986 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14□□□□□ -0.17
VRK1Q99986 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14□□□□□ -0.17
VRK1Q99986 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14□□□□□ -0.17
VRK1Q99986 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
VRK1Q99986 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14□□□□□ -0.17
VRK1Q99986 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VRK1Q99986 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VRK1Q99986 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VRK1Q99986 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
VRK1Q99986 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VRK1Q99986 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
VRK1Q99986 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VRK1Q99986 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
VRK1Q99986 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14□□□□□ -0.17
VRK1Q99986 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VRK1Q99986 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
VRK1Q99986 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
VRK1Q99986 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
VRK1Q99986 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14□□□□□ -0.17
VRK1Q99986 HLA-H-201ENST00000383620 1096 ntBASIC14□□□□□ -0.17
VRK1Q99986 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14□□□□□ -0.17
VRK1Q99986 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14□□□□□ -0.17
VRK1Q99986 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14□□□□□ -0.17
VRK1Q99986 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14□□□□□ -0.17
VRK1Q99986 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14□□□□□ -0.17
VRK1Q99986 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14□□□□□ -0.17
VRK1Q99986 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14□□□□□ -0.17
VRK1Q99986 AC073389.1-201ENST00000595595 795 ntBASIC14□□□□□ -0.17
VRK1Q99986 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VRK1Q99986 AJ011932.1-201ENST00000621707 465 ntBASIC14□□□□□ -0.17
VRK1Q99986 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14□□□□□ -0.17
VRK1Q99986 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
VRK1Q99986 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14□□□□□ -0.17
VRK1Q99986 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VRK1Q99986 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14□□□□□ -0.17
VRK1Q99986 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14□□□□□ -0.17
VRK1Q99986 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14□□□□□ -0.17
VRK1Q99986 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
VRK1Q99986 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14□□□□□ -0.17
VRK1Q99986 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
VRK1Q99986 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14□□□□□ -0.17
VRK1Q99986 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
VRK1Q99986 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14□□□□□ -0.17
VRK1Q99986 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VRK1Q99986 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14□□□□□ -0.17
VRK1Q99986 CICP13-201ENST00000422015 2789 ntBASIC14□□□□□ -0.17
VRK1Q99986 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.99□□□□□ -0.17
VRK1Q99986 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK1Q99986 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK1Q99986 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VRK1Q99986 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK1Q99986 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.99□□□□□ -0.17
VRK1Q99986 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.99□□□□□ -0.17
VRK1Q99986 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.99□□□□□ -0.17
VRK1Q99986 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms