Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.2□□□□□ -0.3
CCL13Q99616 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL13Q99616 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.2□□□□□ -0.3
CCL13Q99616 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL13Q99616 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.2□□□□□ -0.3
CCL13Q99616 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.2□□□□□ -0.3
CCL13Q99616 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL13Q99616 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CCL13Q99616 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL13Q99616 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL13Q99616 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.2□□□□□ -0.3
CCL13Q99616 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CCL13Q99616 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL13Q99616 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CCL13Q99616 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CCL13Q99616 MRPS18AP1-201ENST00000414458 589 ntBASIC13.2□□□□□ -0.3
CCL13Q99616 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.2□□□□□ -0.3
CCL13Q99616 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.2□□□□□ -0.3
CCL13Q99616 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.2□□□□□ -0.3
CCL13Q99616 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL13Q99616 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.2□□□□□ -0.3
CCL13Q99616 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.2□□□□□ -0.3
CCL13Q99616 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL13Q99616 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
CCL13Q99616 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.2□□□□□ -0.3
CCL13Q99616 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL13Q99616 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.2□□□□□ -0.3
CCL13Q99616 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.2□□□□□ -0.3
CCL13Q99616 LINC01115-203ENST00000606068 577 ntBASIC13.2□□□□□ -0.3
CCL13Q99616 AC004461.2-201ENST00000629517 803 ntBASIC13.2□□□□□ -0.3
CCL13Q99616 AF228730.6-201ENST00000641497 218 ntBASIC13.2□□□□□ -0.3
CCL13Q99616 AC084121.3-201ENST00000641716 218 ntBASIC13.2□□□□□ -0.3
CCL13Q99616 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
CCL13Q99616 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL13Q99616 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL13Q99616 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL13Q99616 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL13Q99616 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.2□□□□□ -0.3
CCL13Q99616 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.2□□□□□ -0.3
CCL13Q99616 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
CCL13Q99616 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL13Q99616 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL13Q99616 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.2□□□□□ -0.3
CCL13Q99616 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.2□□□□□ -0.3
CCL13Q99616 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL13Q99616 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL13Q99616 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.2□□□□□ -0.3
CCL13Q99616 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.2□□□□□ -0.3
CCL13Q99616 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL13Q99616 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL13Q99616 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL13Q99616 AC092850.2-201ENST00000623821 2697 ntBASIC13.19□□□□□ -0.3
CCL13Q99616 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CCL13Q99616 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CCL13Q99616 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CCL13Q99616 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CCL13Q99616 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL13Q99616 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 AC074338.1-201ENST00000416825 156 ntBASIC13.19□□□□□ -0.3
CCL13Q99616 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL13Q99616 HMGN1P19-201ENST00000436976 333 ntBASIC13.19□□□□□ -0.3
CCL13Q99616 BCRP1-201ENST00000444246 691 ntBASIC13.19□□□□□ -0.3
CCL13Q99616 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.19□□□□□ -0.3
CCL13Q99616 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.19□□□□□ -0.3
CCL13Q99616 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.19□□□□□ -0.3
CCL13Q99616 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.19□□□□□ -0.3
CCL13Q99616 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL13Q99616 ZNF890P-202ENST00000530367 1156 ntBASIC13.19□□□□□ -0.3
CCL13Q99616 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.19□□□□□ -0.3
CCL13Q99616 TIMM17BP1-201ENST00000545713 516 ntBASIC13.19□□□□□ -0.3
CCL13Q99616 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 SPCS2P1-201ENST00000561636 679 ntBASIC13.19□□□□□ -0.3
CCL13Q99616 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.19□□□□□ -0.3
CCL13Q99616 AL096865.1-201ENST00000606796 927 ntBASIC13.19□□□□□ -0.3
CCL13Q99616 AJ011932.1-201ENST00000621707 465 ntBASIC13.19□□□□□ -0.3
CCL13Q99616 AC004840.1-201ENST00000636359 365 ntBASIC13.19□□□□□ -0.3
CCL13Q99616 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.19□□□□□ -0.3
CCL13Q99616 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CCL13Q99616 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CCL13Q99616 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.19□□□□□ -0.3
CCL13Q99616 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms