Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RNF2Q99496 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.63□□□□□ -0.39
RNF2Q99496 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.63□□□□□ -0.39
RNF2Q99496 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RNF2Q99496 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RNF2Q99496 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RNF2Q99496 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
RNF2Q99496 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RNF2Q99496 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.63□□□□□ -0.39
RNF2Q99496 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RNF2Q99496 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RNF2Q99496 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RNF2Q99496 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RNF2Q99496 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.63□□□□□ -0.39
RNF2Q99496 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RNF2Q99496 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RNF2Q99496 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RNF2Q99496 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
RNF2Q99496 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RNF2Q99496 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
RNF2Q99496 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
RNF2Q99496 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.62□□□□□ -0.39
RNF2Q99496 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
RNF2Q99496 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 ST20-AS1-201ENST00000560255 4223 ntBASIC12.62□□□□□ -0.39
RNF2Q99496 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
RNF2Q99496 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.62□□□□□ -0.39
RNF2Q99496 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
RNF2Q99496 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
RNF2Q99496 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
RNF2Q99496 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
RNF2Q99496 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.62□□□□□ -0.39
RNF2Q99496 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.62□□□□□ -0.39
RNF2Q99496 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.62□□□□□ -0.39
RNF2Q99496 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
RNF2Q99496 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
RNF2Q99496 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.62□□□□□ -0.39
RNF2Q99496 NMU-203ENST00000507338 658 ntTSL 3 BASIC12.62□□□□□ -0.39
RNF2Q99496 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.62□□□□□ -0.39
RNF2Q99496 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
RNF2Q99496 MIR3909-201ENST00000579518 119 ntBASIC12.62□□□□□ -0.39
RNF2Q99496 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC12.62□□□□□ -0.39
RNF2Q99496 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.62□□□□□ -0.39
RNF2Q99496 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.62□□□□□ -0.39
RNF2Q99496 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.62□□□□□ -0.39
RNF2Q99496 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
RNF2Q99496 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.62□□□□□ -0.39
RNF2Q99496 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
RNF2Q99496 AC007292.2-201ENST00000593524 1812 ntBASIC12.62□□□□□ -0.39
RNF2Q99496 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.62□□□□□ -0.39
RNF2Q99496 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.62□□□□□ -0.39
RNF2Q99496 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RNF2Q99496 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RNF2Q99496 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
RNF2Q99496 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RNF2Q99496 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RNF2Q99496 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RNF2Q99496 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
RNF2Q99496 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RNF2Q99496 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RNF2Q99496 AP001282.1-201ENST00000531301 1499 ntBASIC12.61□□□□□ -0.39
RNF2Q99496 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RNF2Q99496 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RNF2Q99496 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
RNF2Q99496 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
RNF2Q99496 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
RNF2Q99496 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RNF2Q99496 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
RNF2Q99496 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
RNF2Q99496 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RNF2Q99496 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RNF2Q99496 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RNF2Q99496 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.61□□□□□ -0.39
RNF2Q99496 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.61□□□□□ -0.39
RNF2Q99496 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms