Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 POM121L8P-201ENST00000417732 1281 ntBASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 POM121L9P-203ENST00000441984 1285 ntBASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 RNMTL1P1-201ENST00000454103 560 ntBASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 AC021723.1-201ENST00000486306 515 ntBASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM43Q96BQ3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM43Q96BQ3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
TRIM43Q96BQ3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
TRIM43Q96BQ3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM43Q96BQ3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 AC013355.1-201ENST00000562625 723 ntBASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 MIR4313-201ENST00000580760 101 ntBASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 AC025181.2-201ENST00000606994 802 ntBASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 AL023803.2-201ENST00000620080 638 ntBASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM43Q96BQ3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 AC104073.2-201ENST00000453737 312 ntBASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms